Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00430 ATGGCACTAAGCCAATTGGGCACCACATACAAGAGGTACATGATCATAATCAAGAATGGAGAGAGCAGAAGAGCAACAGCAGAAGCAGAAGGAGGAAGAAGGACCTGCAAGAGATACTGGACAATAGGTGGAACCCTCAGAAACGTTCCTGTTGGCGGCGGTTCCAGAGCACGTCGTCTCAACCACCCTAACACCACTCCTTCTCCTTCATCAGATCAACAACAACAGTGA 231 0.4892 MALSQLGTTYKRYMIIIKNGESRRATAEAEGGRRTCKRYWTIGGTLRNVPVGGGSRARRLNHPNTTPSPSSDQQQQ 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00430 76 MobiDBLite consensus disorder prediction 47 76 - -
Aip10g00430 76 MobiDBLite consensus disorder prediction 59 76 - -
Aip10g00430 76 Pfam Dof domain, zinc finger 34 58 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00430 Aip-Chr10 4262232 4262622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00430 34 75 C2C2-Dof Transcription Factor Family AT4G21080 47.727 5.94e-09 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aip10g00430 zf-Dof 2.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00430 - - csin:114299061 58.5362