Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00358 ATGGCCCAAGTGCAAGAAAATCATCAAGGGATCAAGCTCTTCGGAGCAACGATCACATTGGACGGTGGAGATTCAAAGGAGGGAAATAAGAAAGAAGAAGATCAAACGGTGGAGAAGAAGCCAGATAAGATCATAGCGTGTCCAAGGTGCAAGAGCATGGAAACCAAGTTCTGTTACTTCAACAATTACAACGTTAACCAACCAAGGCACTTCTGCAAGGGATGCCAGAGGTACTGGACCGCCGGCGGTGCTCTCCGAAACGTCCCCGTTGGTGCCGGTCGCCGTAAGGCCAACAAGCTGCCGTGCCGCGGCGCCGTTTCCGATGGTGCTTGCTTATACGATGAAACTTCCGATGATGTCCACAAGTTTGGGTTGGAGGAAGGGTTGATTTTGGATAAGTGGGATGATGTTGCCGTCCCTCACGGTGATTTCCGGCAGCTTTTTCCGGCCAAGCGCCGGAGGTCCGCCTCAGCTCCGCATCAAGGTCAATGA 492 0.5244 MAQVQENHQGIKLFGATITLDGGDSKEGNKKEEDQTVEKKPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKANKLPCRGAVSDGACLYDETSDDVHKFGLEEGLILDKWDDVAVPHGDFRQLFPAKRRRSASAPHQGQ 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00358 163 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 1 157 - -
Aip10g00358 163 PANTHER CYCLIC DOF FACTOR 2 1 157 IPR045174 GO:0003700|GO:0006355
Aip10g00358 163 ProSitePatterns Zinc finger Dof-type signature. 47 83 IPR003851 GO:0003677|GO:0006355
Aip10g00358 163 ProSiteProfiles Zinc finger Dof-type profile. 45 99 IPR003851 GO:0003677|GO:0006355
Aip10g00358 163 Pfam Dof domain, zinc finger 43 99 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00358 Aip-Chr10 3583799 3585150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g00358 6 157 C2C2-Dof Transcription Factor Family AT2G34140 53.216 1.38e-52 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aip10g00358 zf-Dof 3.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00358 - - vra:106779806 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00358 10 3583799 3585150 Aip10g00358 10 3583799 3585150 ECH