Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03744 ATGGCAATCCAACATCACAATGACCAACTAGAACAACAACAACATCACCACCAACACGCTGTCCTCGATGCCCTTTACTGCGACGAAGGAAAGTGGGAAGAAGAAGAAGAAGAGTTCTCAGGAGAGAGTGATGTCACAACAAACCACGACCATGAAGAAGAAGATGATGATGGTGTCAACTTCAACTTGAACTTCCATTCCCTTGACCCTCTGCTCTTGTTGGAGCAGGACATGTTCTGGGAAGATGAAGAGCTCAACACCCTCTTCTCCAAAGAGAAGCTTGACCAAGAAGCCTATTATAACAATGCCGATGATGTCATGAAAGCATTGGATCCTTCTTCTTCTTCTTCTTCTTCTTCTGTGTGTATGGCTCGTCGTGAAGCAGTTGAATGGATGCTTAAGGTGAATGCTCATTACGGGTTCTCAGCTCTGACGGCAACACTTGCCGTTACTTATCTGGATAGGTTCCTCTTGAGCTTCCATTTTCAAAGGGAGAAGCCATGGATGATCCAACTTGCCTCTGTCACTTGCATCTCTTTGGCTGCTAAAGTTGAAGAAACTCAAGTGCCTCTTCTCTTGGACCTTCAAGTTGAAGATGCAAAATATGTGTTTGAGGCAAAGACTATTCAGAGAATGGAGCTTCTGATTCTGTCCACCTTGAATTGGAAGATGCACCCTGTGACACCACTCTCATTTCTAGATCACATTATAAGGAGGTTGGGACTCAAAACACATCTTCACTGGCAGTTTCTCAAGCGTTGTGAGAATCTTCTTCTCTCTTTGCTATTGGATTCAAGATTTGTTGGTTGTCTTCCTTCTGTATTGGCCACTGCAACAATGCTGAATGTAATAGGCCAGATTCATCACAGCACTGAGGGAGTGGAATACAAAAACCAACTTCTTAGTGTTCTCAACATTAACAAGGAGAAGGTAGATGAATGTTATAATGGCATAGTGGAGGTGACAAATAACAATAATAATGGTGGTAGGGGGAAGAAGAGAAAGTATGAGGAAATCCCTGGTAGCCCAAGTGGCGTAATTGATGCAGTGTTCAGCTCTGATGATGGTTCCAACGATTCATGGGAAGTGGTGGGGTCATCATTGTTATGTTCATCACCATCACAAGAGGAGCCTCAGCCTCAGCCTCTCTTGAAGAACAAGAAACAACAATTGAAATTGTCATCACTTAACAGGGTCATTGTCGGAATTGTTGGCACCACCCCATAA 1227 0.436 MAIQHHNDQLEQQQHHHQHAVLDALYCDEGKWEEEEEEFSGESDVTTNHDHEEEDDDGVNFNLNFHSLDPLLLLEQDMFWEDEELNTLFSKEKLDQEAYYNNADDVMKALDPSSSSSSSSVCMARREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLASVTCISLAAKVEETQVPLLLDLQVEDAKYVFEAKTIQRMELLILSTLNWKMHPVTPLSFLDHIIRRLGLKTHLHWQFLKRCENLLLSLLLDSRFVGCLPSVLATATMLNVIGQIHHSTEGVEYKNQLLSVLNINKEKVDECYNGIVEVTNNNNNGGRGKKRKYEEIPGSPSGVIDAVFSSDDGSNDSWEVVGSSLLCSSPSQEEPQPQPLLKNKKQQLKLSSLNRVIVGIVGTTP 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03744 408 MobiDBLite consensus disorder prediction 32 58 - -
Aip09g03744 408 SUPERFAMILY Cyclin-like 116 225 IPR036915 -
Aip09g03744 408 PANTHER CYCLIN D3.1 PROTEIN 58 366 - -
Aip09g03744 408 PANTHER CYCLINS 58 366 IPR039361 -
Aip09g03744 408 Pfam Cyclin, C-terminal domain 227 336 IPR004367 -
Aip09g03744 408 CDD CYCLIN 125 217 IPR013763 -
Aip09g03744 408 Gene3D - 123 225 - -
Aip09g03744 408 SMART Cyclin_C_2 227 355 IPR004367 -
Aip09g03744 408 MobiDBLite consensus disorder prediction 42 58 - -
Aip09g03744 408 Pfam Cyclin, N-terminal domain 123 224 IPR006671 -
Aip09g03744 408 ProSitePatterns Cyclins signature. 125 156 IPR006671 -
Aip09g03744 408 SMART cyclin_7 130 218 IPR013763 -
Aip09g03744 408 Gene3D - 226 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03744 Aip-Chr9 144269401 144271394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03744 1 321 Core Cell Cycle Gene Families AT4G34160 53.271 6.49e-107 318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03744 09 144269401 144271394 Aip09g03744 09 144269401 144271394 ECH
Aip07g03542 07 125459191 125469325 Aip09g03744 09 144269401 144271394 ECH
Aip06g03745 06 135099957 135103313 Aip09g03744 09 144269401 144271394 ECH
Aip05g00605 05 7432013 7437504 Aip09g03744 09 144269401 144271394 PCT