Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03743 ATGGGTCGCTCCCATGTCCTCCTCCTCTTGCTCTCCCTTCTGGCGGCGGCCGTCGTGGCGTCAGCACTCGACATGTCGATCATCGACTACGACGCGAAGTTAGAAGCCATGACGGAGAGCCACCTCATGAACCTCTACGAGTCATGGCTGGTGAAGCATGGCAAGGTCTACAACGCGTTGGGAGAGAAAGAGAGAAGGTTCGAGATCTTCAAGGATAACCTGCGGTTCATTCACGAACATAACAGCGCTGGGAACAAACCCTACAAGCTTGGCTTGAACAAGTTCGCCGATCTCACCAATGAAGAGTACAGAGCCAGGTACCTCGGCACCAAACCCCGCAGCTCCTCCGAGCAACAGCGATTGCTCTCTGGCAACAGGAAGAGTGACCGTTACGCATTCCGCGCCGGCGACGAGTTGCCTGCTTCTGTTGATTGGAGGGAGAAGGGTGCCGTCTCCCCCGCTAAGGATCAAGGCCAATGCGGGAGTTGTTGGGCTTTCTCGACGGTTGCTGCGGTGGAAGGGATCAATAAAATTGTGACGGGGGAGCTGATATCTCTGTCAGAGCAAGAGTTGGTGGATTGTGATAGGAGCTTCAACATGGGATGCAATGGAGGCCTCATGGACAATGCATTCGACTTCATTCTCAACAATGGAGGCATTGATTCTGAGCAAGATTACTCCTACCATGCTCGTGAAGGTGTTTGTGATACCAATAGGAAAAATGCTCATGTAGTTACCATAGATGGTTATGAAGATGTGCCAGAAAATGATGAGAAGGCGTTGGCTAAGGCTGTTGCACACCAACCTGTTAGTGTTGCCATTGAAGCTGGTGGCAGGGCCTTCCAACTTTATCAATCTGGTATCTTCACCGGCATATGTGGAACTGAACTTGACCACGGTGTTGCCGCAGTTGGGTACGGAACAGAAGACGGTAAAGACTACTGGTTGGTGAGGAATTCATGGGGTTCAGGATGGGGAGAGGAGGGTTACATCAAGCTGGAGAGAAATCTTGCACATGGCAGAACCGGAAAGTGTGGTATCGCAATGGAGGCATCATATCCAATCAAGAACAGCACCAACCCACCAAACCCTGGTCCCTCACCTCCATCCCCAGTCAACCCTTCCACTGTCTGTGACGAATACTACTCTTGCCCTTCTCGCACCACTTGCTGCTGCGTCTTCGAGTATGCAGGATTTTGCTTTGGATGGGGATGCTGCCCTATGCAATCCGCCACTTGCTGCGACGACGGTGCTAGCTGCTGTCCTCCTGAGTTTCCCGTCTGCGACACTCGCGCCGGAACCTGCAGATTGAGTAAAGATAACCCATTCGGAGTGAATTCCTTGCCACGAACACGTGCTACAAGCACTTGGACTCAAAGGAAAGTTGCCATGAAAGACTGCTTATTGGCATGA 1413 0.5195 MGRSHVLLLLLSLLAAAVVASALDMSIIDYDAKLEAMTESHLMNLYESWLVKHGKVYNALGEKERRFEIFKDNLRFIHEHNSAGNKPYKLGLNKFADLTNEEYRARYLGTKPRSSSEQQRLLSGNRKSDRYAFRAGDELPASVDWREKGAVSPAKDQGQCGSCWAFSTVAAVEGINKIVTGELISLSEQELVDCDRSFNMGCNGGLMDNAFDFILNNGGIDSEQDYSYHAREGVCDTNRKNAHVVTIDGYEDVPENDEKALAKAVAHQPVSVAIEAGGRAFQLYQSGIFTGICGTELDHGVAAVGYGTEDGKDYWLVRNSWGSGWGEEGYIKLERNLAHGRTGKCGIAMEASYPIKNSTNPPNPGPSPPSPVNPSTVCDEYYSCPSRTTCCCVFEYAGFCFGWGCCPMQSATCCDDGASCCPPEFPVCDTRAGTCRLSKDNPFGVNSLPRTRATSTWTQRKVAMKDCLLA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03743 470 SMART pept_c1 139 355 IPR000668 GO:0006508|GO:0008234
Aip09g03743 470 SUPERFAMILY Cysteine proteinases 38 355 IPR038765 -
Aip09g03743 470 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 297 307 IPR025660 -
Aip09g03743 470 Gene3D Granulin 375 437 IPR037277 -
Aip09g03743 470 SMART Inhibitor_I29_2 46 103 IPR013201 -
Aip09g03743 470 Gene3D Cysteine proteinases 24 357 - -
Aip09g03743 470 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 33 385 - -
Aip09g03743 470 Pfam Cathepsin propeptide inhibitor domain (I29) 46 103 IPR013201 -
Aip09g03743 470 Pfam Granulin 389 435 IPR000118 -
Aip09g03743 470 SUPERFAMILY Granulin repeat 376 408 - -
Aip09g03743 470 PRINTS Papain cysteine protease (C1) family signature 157 172 IPR000668 GO:0006508|GO:0008234
Aip09g03743 470 PRINTS Papain cysteine protease (C1) family signature 299 309 IPR000668 GO:0006508|GO:0008234
Aip09g03743 470 PRINTS Papain cysteine protease (C1) family signature 314 320 IPR000668 GO:0006508|GO:0008234
Aip09g03743 470 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 157 168 IPR000169 -
Aip09g03743 470 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 314 333 IPR025661 -
Aip09g03743 470 CDD Peptidase_C1A 140 354 IPR039417 -
Aip09g03743 470 Pfam Papain family cysteine protease 139 355 IPR000668 GO:0006508|GO:0008234
Aip09g03743 470 PANTHER CYSTEINE PROTEASE 33 385 - -
Aip09g03743 470 SMART GRAN_2 378 435 IPR000118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03743 Aip-Chr9 144254784 144257191 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03743 09 144254784 144257191 Aip09g03743 09 144254784 144257191 ECH
Aip09g03743 09 144254784 144257191 Aip01g01002 01 20382492 20386423 ECH
Aip06g03751 06 135157387 135161869 Aip09g03743 09 144254784 144257191 ECH