Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03729 ATGGTGGCTTTTGGCGGTAAAAAGATGCGCCAAATGGTTGTTGGCTTCGGTGGAAGTGGCATCGGCCAGGTCGTTGCCGCCGTCACCGTTTCCTTCCTCCTCCGCCTCTTCACTTCTCCCGGTCCCGCACTCCCTCCGGACGATGAAGATAATGACGGCGGCTACGATGTGCCGGAGAACGGCATCCACGACGCGGAAGCTCCGCCGTCCGGAAAGGTTACGCCGGTTACAATCCGATGGAACAACATCAATTGCTCCCTTTCCGATAAATCGTCCAAGTCCGTGAGGATTTTGCTGAAAAATGTGAGTGGAGAAGCAAAACCTGGAAGGTTGCTAGCTATAATGGGGCCTTCGGGTTCAGGGAAGACAACTCTGCTTAATGTTCTTGCAGGCCAGTTGGCAGCATCGCCTCGGTTGCATTTGTCAGGCCGTTTGGAGTTCAATGGAAAGCCTAGTTCAAGGAACACTTACAAGTTTGCTTATGTGAGGCAGGAGGATCTCTTCTTCTCACAACTCACTGTTCGGGAAACATTGTCTCTTGCTATAGAACTCCAGCTTCCCCACATTTCATCTGCAGAAGAGAGAGATGAATACGTGAACAATCTCCTTTTCAAACTAGGCTTGGTCAGTTGTGCTGATACCAATGTTGGTGATGCGAAAGTTCGTGGAATCAGTGGTGGTGAAAAGAAACGCTTATCCTTGGCATGTGAATTACTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAAGCTGAGAAAGTCGTGGAAACTCTTCAACAACTTGCCCAAGATGGTCATACTAGGGTTCACTTGTGTATGCTGGTCCTGCCCATGATGAACCGTTGGCATACTTCTCAAAATTTGGGTACCACTGCCCTGATCATNNNNNNNTTGGCTGATCTTATATCTGTAGACTACAGTTCTGCTGATAGTGTTTATTCCTCTCGAAAAAGGATCGATGGTCTTGTCGAGTCATTCTTGCAAAGGCTATCTACATCTTTTATAATATATGCAACTCCAATTACTGTAGATGAGCTCTCAAAAAGTAGAAAGAAAATCAGTAGGAGGACTATTGTGCAGAAGAAAGGAGGTTGGTGGAAGCAATTTTGGTTGCTTCTTAGGCGAGCATGGATGCAGGCTTCCCGAGATGTACCAACAAACAAAGTTCGAGCAAGGATGTCAATAGCATCAGCAATTATCTTCGGTTCAGTTTTCTGGAGAATGGGAAATTCCCAGACTTCAATACAAGACAGAATGGGATTACTTCAGGTTTCCGCAATAAATACAGCTATGGCAGCTCTCACAAAGACTGTTGGTGTATTTCCAAAGGAACGTGCCATTGTTGATAGAGAACGTGCAAAAGGCTCCTATTCTTTGGGTCCCTATCTGTTCTCAAAATTGTTAGCAGAGATTCCGATTGGAGCCTCATTTCCATTGATGTTTGGTGCTGTTTTATACCCAATGGCTCGTCTTCATCCTACTTTGCTCAGATTTGGGAAGTTCTGTGGAATTGTCACCATGGAGTCTTTTGCTGCATCTGCAATGGGTCTCACTGTTGGTGCTATGGTTCCAACCACCGAAGCTGCAATGGCGGTAGGCCCATCTCTTATGACAGTTTTTATTGTATTTGGAGGCTACTATGTCAATCCTGAGAATACCCCCATCATCTTCCGTTGGATTCCCAGCGTTTCTCTAATTAGATGGGCCTTCCAAGGACTTTGCATCAATGAATTTAGCGCTGTGGCACTTGAGCGCCTTTCCTTTGGAAAAAGTAGGATTAGTGATACAGTGTTAGCACAAAATAGAATACTGTTCTTCTGGTATTGCACCACCTACCTTCTCCTTGAGAAAAACAAGCCTAAATACCAGCAACTTGAGCCAATCCCACTTGAACAAAACAAAACACACTTCAAACTCGAGGAATTAAACCCTGAACAAGTTGATCAGACACTTGAATCTCAACCTGTCAGCCAAGATGGATCCAACCAGCCTCTTGAGTCACCTGAAGTGGATCCTATTGGTCCATTTGTCTTAGAAGGTACTAAGTAA 2073 0.4525 MVAFGGKKMRQMVVGFGGSGIGQVVAAVTVSFLLRLFTSPGPALPPDDEDNDGGYDVPENGIHDAEAPPSGKVTPVTIRWNNINCSLSDKSSKSVRILLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGRLEFNGKPSSRNTYKFAYVRQEDLFFSQLTVRETLSLAIELQLPHISSAEERDEYVNNLLFKLGLVSCADTNVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVVETLQQLAQDGHTRVHLCMLVLPMMNRWHTSQNLGTTALIXXXLADLISVDYSSADSVYSSRKRIDGLVESFLQRLSTSFIIYATPITVDELSKSRKKISRRTIVQKKGGWWKQFWLLLRRAWMQASRDVPTNKVRARMSIASAIIFGSVFWRMGNSQTSIQDRMGLLQVSAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLAEIPIGASFPLMFGAVLYPMARLHPTLLRFGKFCGIVTMESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGLCINEFSAVALERLSFGKSRISDTVLAQNRILFFWYCTTYLLLEKNKPKYQQLEPIPLEQNKTHFKLEELNPEQVDQTLESQPVSQDGSNQPLESPEVDPIGPFVLEGTK 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03729 690 Gene3D - 71 283 IPR027417 -
Aip09g03729 690 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 277 - -
Aip09g03729 690 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 78 323 IPR003439 GO:0005524
Aip09g03729 690 MobiDBLite consensus disorder prediction 43 73 - -
Aip09g03729 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 277 IPR027417 -
Aip09g03729 690 MobiDBLite consensus disorder prediction 649 690 - -
Aip09g03729 690 ProSitePatterns ABC transporters family signature. 224 238 IPR017871 GO:0005524
Aip09g03729 690 PANTHER ATP-BINDING CASSETTE TRANSPORTER 305 639 - -
Aip09g03729 690 PANTHER ABC TRANSPORTER G FAMILY MEMBER 7 1 277 - -
Aip09g03729 690 PANTHER ABC TRANSPORTER G FAMILY MEMBER 7 305 639 - -
Aip09g03729 690 MobiDBLite consensus disorder prediction 654 673 - -
Aip09g03729 690 Pfam ABC-2 type transporter 376 586 IPR013525 GO:0016020|GO:0140359
Aip09g03729 690 Pfam ABC transporter 99 251 IPR003439 GO:0005524
Aip09g03729 690 SMART AAA_5 108 372 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03729 Aip-Chr9 144142596 144148353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03729 98 277 Calmodulin-binding Proteins AT2G36910 29.167 7.87e-10 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03729 09 144142596 144148353 Aip09g03729 09 144142596 144148353 ECH