Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03713 ATGGCCGCGACGCCGTCGTCCTCCGCCGCGGGAGCCACCAACATCATGCTCGCAATTTTCGAGAAGAAGACTAATTCCGTCGACCTGTACCGCCCTCTACGCAACTACATCGCATTCAACTACTCCGAGCGTGAGGCCCAGAACCTCGAAGACGATCTCCAAACCCTAAAGCAGCAACGCGCTGACATCGAGCGCCACTCCGATCCCTCCCTCCCTTCCCGCCGGGACCTTCTCCAGTCCTACTTCAGAGCCCTCTGCCTCGTTGAGACCCGATTCCCAATCTCCCCCGACCCGGCGCACGTCAACGCCCTCACCTTCGTCTGGTTCGACGCCTTCAAGCCCAAGCAGAAGTCTTCCCAGCAGAACATCCATCTCGAGAAGGCCTCCGTACTCTTCAATTTGGGAGCAGTGTACAGCCAAATTGGGCTTTCGTATGATCGCAACACCGTGGACGGCCGTCGCCAGGCCTCACATGCGTTTATAGCAGCCGCGGGGGCGTTTGCTTATTTGAGGGATAATGCGTCCATGAAAGCCTCCATTGGAGGATCCGCCACCGTGGACATCTCGGGGGAGTGCGCTGGGATGCTTGAGAAGCTGATGCTAGCTCAGGCTCAAGAGTGCGTCTTTGAGAACAGTATCGCCAAAGGAAGCACGCCAGGTGTTTGTTCCAAGATCTCTAGGCAGGTTGGGCTGTATTATGAGGAAGCTTTAGCTGCATTGAATGTTGCACCTTTAAACACACATTTTGATAAATCGTGGATAGCGCATGTCCAGCTGAAATCGGCTTTGTTCTATGCTGAAGCTTGCTTTAGGTATGGACTGGAGCTACATGAAAAAGAAGAAATAGCAGAGGAGATTGCACGACTCAGGAGTGCCATTAACGTGCTAACTGAGGCGAAGAGAAATTCAAAGGGTGCTGCAGCACAGATTCTCGATGCAATTGGCAAGTTAGAGGCCAATATTAACCGAAACTTGGAAAGGGCTGTCAAGGAGAACGACAGGGTTTACCTCATGAGAGTTCCTTCTCCCAGTTCCCTACCACCTCTTGCAGCATTTTCTATGGTGAAGCCAATGGCAATGAGTGAGGTGCTGGATGCAAGCAAAGAGAAGATGTTTGCTAGCCTTGTACCTGACAGTAGTACAAAGGCCCTCTCCAGGTATACTGAAATGGTAGATGACATTATAAGAATGCAGGCTGAGAAGCTACAGCAAGCTAGTGAGCTAACACGAGTTAGGCTCAAGGAAATGGAACTTCCGGATTCTATTCTTGCTTTGGAAGGAAATTTTACTCTTCCAACAAGTCTCAAAGAAGATGTGGAGGCTGTGCAGATCAGTGGGGGACCTGCTGGCTTGGAAGCAGAGTTACAGCAACTGAGGGACCTAAGGAGGGTGAATCAAGAATTATTGGTCCAGACTGAGGAGCTGTTGCAAAAGGAAGCAAGAGAAGATTCTCAATTTAGAAGCCAGTTTGGGACAAAATGGACTAGACCTCAATCAAGCACTTTGACAAAGAACTTGCAGGATAGGCTGAACAGGTTTGCAGGTAACTTGAAGCAAGCTGCTGAAAGTGATGGTCGAATTGAGCGTTCGGTTAGAGAAAATTCGGCATTCATGTCAATCCTTGATGCCCGCCCGATTGAATCCGCACTTCCAACCTTGGCAAGGCCGATTATGTCTTTAGATCAAAATGAAGATGCTATTGTGGGATCTCTCAAGCAGAGCCTGAGGCAACTAGAAACTCTTGGAGCCCAAAGGGCTGGTCTTGAAGACATGCTTAAAGAGATGAAAAGAAAGGATGATATATTACCAAAGTTGATGACATCCACTGGCTCTCATGAGGATCTCTTTAAGAAGGAAATAGCAAAATATGACCATATTTGTGAAGAAATAGCTCAAAATATTGAGGCACAGGAGCAACTGTTGATGCAGATCCAGGCTCAGAATGATGAATTCTCGGCTCTCTTCAATCTTGAAGACTATAAAGCTTCGCGTGAAAAATGCTATAAGCAGATTGAAGCTGCCATAGCCAAGTTTCGAGAGATAAAAGACAACATTAATGAAGGGTTAAAATTCTATGTTACTCTGCAGGATGCGATCACAAATGTAAAGCAGCAGAGCAATGACTTCGTAATGACAAGGAACATCCAGTGCAGAGAAATGATTGAAGATGTTCAAAGAAAAGTGGCTAATATGAGTTTCCAAGATAAAAACTCAGGTGCTTTTAGTAGTAGCTACCCACCAGTTGGAAGCCAAAACCAAAGACCCAGTACACAACAAACAGATCCTCGTCCCCAAACACCTTATTATCAACCACCTGAGCAGCCTCCGGTTTCTTCCTACGGACATCCCCTTCCCTCATATAGTTCAGCAGCGCATCAGCCTCACCTCCATACCACATTCCACCAACATCTGCCGCTCCATACCAACCCCATCAGGTTCATCAGCAGGCACCAGCAGAGTATGGCCAACCTGCATATCCTGGATGGCGTGGTCCATACTATAATGCGCCGGCTCAGCAACCTGGTTCTGTTCCCAGGCCTCCATATACTGTTCCATCTCCATACCCTCCACCTCATCAAGGTGGATACTATAAGCAGCAATAGTGTTAATCCAACCGTCTTCTATAATAAGAGAGATTATTCTTTCCGTCATCTCCTCAACAAATCGGATTTAGACATACCTGTTATCTTAAAGCTTTAG 2700 0.4763 MAATPSSSAAGATNIMLAIFEKKTNSVDLYRPLRNYIAFNYSEREAQNLEDDLQTLKQQRADIERHSDPSLPSRRDLLQSYFRALCLVETRFPISPDPAHVNALTFVWFDAFKPKQKSSQQNIHLEKASVLFNLGAVYSQIGLSYDRNTVDGRRQASHAFIAAAGAFAYLRDNASMKASIGGSATVDISGECAGMLEKLMLAQAQECVFENSIAKGSTPGVCSKISRQVGLYYEEALAALNVAPLNTHFDKSWIAHVQLKSALFYAEACFRYGLELHEKEEIAEEIARLRSAINVLTEAKRNSKGAAAQILDAIGKLEANINRNLERAVKENDRVYLMRVPSPSSLPPLAAFSMVKPMAMSEVLDASKEKMFASLVPDSSTKALSRYTEMVDDIIRMQAEKLQQASELTRVRLKEMELPDSILALEGNFTLPTSLKEDVEAVQISGGPAGLEAELQQLRDLRRVNQELLVQTEELLQKEAREDSQFRSQFGTKWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDGRIERSVRENSAFMSILDARPIESALPTLARPIMSLDQNEDAIVGSLKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSHEDLFKKEIAKYDHICEEIAQNIEAQEQLLMQIQAQNDEFSALFNLEDYKASREKCYKQIEAAIAKFREIKDNINEGLKFYVTLQDAITNVKQQSNDFVMTRNIQCREMIEDVQRKVANMSFQDKNSGAFSSSYPPVGSQNQRPSTQQTDPRPQTPYYQPPEQPPVSSYGHPLPSYSSAAHQPHLHTTFHQHLPLHTNPIRFISRHQQSMANLHILDGVVHTIMRRLSNLVLFPGLHILFHLHTLHLIKVDTISSNSVNPTVFYNKRDYSFRHLLNKSDLDIPVILKL 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03713 899 Pfam BRO1-like domain 16 394 IPR004328 -
Aip09g03713 899 ProSiteProfiles BRO1 domain profile. 14 409 IPR004328 -
Aip09g03713 899 Coils Coil 627 654 - -
Aip09g03713 899 MobiDBLite consensus disorder prediction 765 779 - -
Aip09g03713 899 CDD BRO1_Alix_like_1 16 371 - -
Aip09g03713 899 MobiDBLite consensus disorder prediction 739 764 - -
Aip09g03713 899 CDD V_Alix_like_1 377 713 - -
Aip09g03713 899 Coils Coil 279 299 - -
Aip09g03713 899 Gene3D alix/aip1 like domains 12 376 IPR038499 -
Aip09g03713 899 Coils Coil 39 66 - -
Aip09g03713 899 PANTHER PROGRAMMED CELL DEATH 6-INTERACTING PROTEIN-LIKE 5 798 - -
Aip09g03713 899 Coils Coil 578 598 - -
Aip09g03713 899 SMART BRO1_2 15 399 IPR004328 -
Aip09g03713 899 Gene3D alix/aip1 like domains 423 704 - -
Aip09g03713 899 Pfam ALIX V-shaped domain binding to HIV 431 715 IPR025304 GO:0005515
Aip09g03713 899 PANTHER PCD6 INTERACTING PROTEIN-RELATED 5 798 IPR045251 GO:0071985
Aip09g03713 899 Coils Coil 451 478 - -
Aip09g03713 899 MobiDBLite consensus disorder prediction 739 788 - -
Aip09g03713 899 Gene3D alix/aip1 in complex with the ypdl late domain 377 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03713 Aip-Chr9 144037131 144041791 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03713 09 144037131 144041791 Aip09g03713 09 144037131 144041791 ECH