Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03709 ATGGAAAGAGTAGTTAAATCGGGTCTTGAAACTCCACTGTGCCCTCCAAACCAAGAACCTGATGATCAGAGATTTGAACAATGTTGTTGCCTTAGAGAAGACATTGTTGAGGAAGCTAAGAAGCAACTATGGCTAGCAGGGCCTCTTATTGCAGTTAGTTTGCTTCAATTCAGCTTACAAATGATATCTATAATGTTTGTTGGCCATCTTGGCAACTTGTTTCTTTCTGGTGCTTCCTTGGGTTTCTCCTTTGCTTCTTGCACTGGTTACAGTGTTTTGTTAGGAATGGGGAGTGCATTGGAGACACTATGTGGGCAAGCATATGGAGCCAAGAAGTATCACATGCTAGGAATCCACACACAAAGGGCAATGGTTGTTCTTCTATCTCTGAGTATTCCATTATCACTAATCTGGTTTTACACAAGCAACCTTCTTATTGTAATGGGACAAGACCATGAGATATCGGCTGTGGCCGGAACATATAATCGCTGGATGATCCCTGGCCTTTTTGCTTATGCCATCCTTCAATGCCTCAACAGATTTCTGCAGACTCAAAACAATGTTTTCCCAATGCTTATAACCTCTGGAATCACAACTTTGGTGCATGCAGCATTTTGTTGGCTTTTTGTGTATGAATTTGACTTAGGTAGCAAAGGCGCAGCATTGGCCATCAGCTTGTCTTATTGGGTTAATGTGTTCCTATTGGTGATTTACATAAACTGTTCTAGAGCTTGTGCATCAACTTGGAATGGTGTTTCCAAAGAGGCCTTGAATGACATTCTCAGCTTTATAAAACTAGGAGTTGCTTCAGCAGTTATGATATGCTTCGAATACTGGTCGTTTGAGATGGTTGTGCTTCTCTCAGGTCTTCTGCCAAACCCACAACTAGAGACATCTGTTTTATCAATAAGCCTTAATACATGTTGGATGGTTTATCAGATATCTGTTGGTCTTGGTGGTGCCATAAGCACCCGTGTTTCAAATGAACTGGGTGCTGGGAATGCACGAGGCGCGCTCTTGGCTCTTCATGTCATGATTGCAACCGCCATATTAGAGGGTACAACAATAGCATTGATCACCATTTTGGTGAGGAATGTTTGGGGAAAGCTCTACAGCAATGAAGATCAAGTTATAAGATATGTTTCCAAGATGATGCCTCTACTTGCACTCTCTGACTTCCTGGATGGCTTCCAGTGTGTTCTTTCAGGAGCTGCTAGAGGGTGTGGTTGGCAAAATCTATGTGCATCTATAAACCTTGGTGCTTACTATGTTGTGGGAATTCCTTCTGCTATCTTATTTGCATTTGTGTTTCATATGGGAGGGATGGGACTTTGGATAGGAATCATTTGTGGACTTTCTGTTCAGGGGATAGCACTAGTTACAGTAAATGTATGCACAGATTGGGATAGAGAGGCAAGGAAAACAGTTCACATAACTCAGGAAACTACTAACATGGTTATAGAACCGTAG 1470 0.4204 MERVVKSGLETPLCPPNQEPDDQRFEQCCCLREDIVEEAKKQLWLAGPLIAVSLLQFSLQMISIMFVGHLGNLFLSGASLGFSFASCTGYSVLLGMGSALETLCGQAYGAKKYHMLGIHTQRAMVVLLSLSIPLSLIWFYTSNLLIVMGQDHEISAVAGTYNRWMIPGLFAYAILQCLNRFLQTQNNVFPMLITSGITTLVHAAFCWLFVYEFDLGSKGAALAISLSYWVNVFLLVIYINCSRACASTWNGVSKEALNDILSFIKLGVASAVMICFEYWSFEMVVLLSGLLPNPQLETSVLSISLNTCWMVYQISVGLGGAISTRVSNELGAGNARGALLALHVMIATAILEGTTIALITILVRNVWGKLYSNEDQVIRYVSKMMPLLALSDFLDGFQCVLSGAARGCGWQNLCASINLGAYYVVGIPSAILFAFVFHMGGMGLWIGIICGLSVQGIALVTVNVCTDWDREARKTVHITQETTNMVIEP 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03709 489 Pfam MatE 270 431 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip09g03709 489 Pfam MatE 48 208 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip09g03709 489 CDD MATE_eukaryotic 38 474 IPR045069 GO:0042910|GO:1990961
Aip09g03709 489 MobiDBLite consensus disorder prediction 1 20 - -
Aip09g03709 489 PANTHER MULTIDRUG RESISTANCE PROTEIN 18 478 - -
Aip09g03709 489 TIGRFAM matE: MATE efflux family protein 48 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip09g03709 489 PANTHER PROTEIN DETOXIFICATION 18 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03709 Aip-Chr9 144010793 144014297 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03709 09 144010793 144014297 Aip09g03709 09 144010793 144014297 ECH