Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03708 ATGACTATGAACATGGAGGAGCCCCTATTGGCACCTAGAGAGAAAGAACTAGAGAGAAAAAGAAGAAGAGGAGTAACATGGAAAACCTTAATCCAAGAACTGAAGAGTATTTGCATCATAGCAGGTCCTATGGTAGCTGTTACAGCCTTCCAGTATCTTCTACAGATTGTATCTATCATGATGGTTGGTCACCTTGGCGAGCTTTATCTCTCTGCCACCGCCTTAGCTTTCTCCCTTTCCACCGTCACTGGTTTCAGCCTTCTTCTGGGGATGGCTAGTGGTCTGGAAACTACTTGTGGACAGGCTTATGGAGCTCAGCAATACCAAAGAATTGGAAAGCAAACATACACTGCCATCTTCTGTCTAATATTGGTGTCTGTTCCTCTGTCTTTCATTTGGATCAACATTGAACAGATACTAGTGTTCCTTGGTCAGGACCCTATGATTGCTCATGAAGCTGCAAAGTTCATGCTTTGGCTTGTTCCAGCACTTTTGGCATACTCAATTCTGCAGCCATTAGTTCGATACTTCCAAATGCAAAGCTTGCTTCTTCCTATGCTAATAACCTCTTGTGTAGTCTTTTGTGTCCACATACTTCTTTGTTGGGCATTGGTGTTCAAGACTCAACTCAAGAATGTTGGTGGTGCTTTATCATTTAGCATCTCAATCTGGTTGAATGTCATCATTCTTGGATTATACATGAGATACTCTTCAGCATGTGCCAAAACACGAGCTCCACTCTCCATGGACATATTCCAAGGAACTCGCGAGTTCTTTCGATTTGCAGTCCCTTCTGCAGTAATGATTTGTCTTGAATGGTGGTCATTTGAGCTGATAATCTTGCTATCTGGGCTGTTACCAAATCCACAACTTGAAACTTCAGTACTATCAGTTTGTCTTAATACCATTTCAACTGTGTATTGTATCCCTTTTGGAATTGGTGCTGCAGCAAGCACAAGGATTTCAAATGAATTAGGAGCTGGGAATCCAGAGGCTGCCCGGATTGTGGTGATGGCAGCAATGTGTCTTGCAATGATGGAGACAAGTGTAGTAAGTGCAACTCTTTTCAGCTGCCGCCACATCTTTGGATATGTTTTCAGCAGTGAGAAGGAAGTTGTTGATTATGTAACTGTCATGGCTCCTTTGGTCTGTCTCTCAGTCATATTTGACAGCATGCAAGGTTTTCTTTCAGGGGTTGCTAGAGGTTGTGGATGGCAGCACTTAGGTGTTTATGTGAATCTTGGAGCATTCTACCTCTGTGGGATTCCGGCTGCTGCCACATTGGCATTTTGGGTGAAACTGAGAGGAATAGGACTTTGGGTTGGTATACAAACTGGATCTTTTCTTCAAGTTTCTCTACTTGCTATCATAACAAGTTGCATCAATTGGGAACAACAAGCAATCAAAGCAAGAACGAGAATATTTGAGGGTCAATTTTCAGCAGACAGTAGTACATTGGTATGA 1464 0.4262 MTMNMEEPLLAPREKELERKRRRGVTWKTLIQELKSICIIAGPMVAVTAFQYLLQIVSIMMVGHLGELYLSATALAFSLSTVTGFSLLLGMASGLETTCGQAYGAQQYQRIGKQTYTAIFCLILVSVPLSFIWINIEQILVFLGQDPMIAHEAAKFMLWLVPALLAYSILQPLVRYFQMQSLLLPMLITSCVVFCVHILLCWALVFKTQLKNVGGALSFSISIWLNVIILGLYMRYSSACAKTRAPLSMDIFQGTREFFRFAVPSAVMICLEWWSFELIILLSGLLPNPQLETSVLSVCLNTISTVYCIPFGIGAAASTRISNELGAGNPEAARIVVMAAMCLAMMETSVVSATLFSCRHIFGYVFSSEKEVVDYVTVMAPLVCLSVIFDSMQGFLSGVARGCGWQHLGVYVNLGAFYLCGIPAAATLAFWVKLRGIGLWVGIQTGSFLQVSLLAIITSCINWEQQAIKARTRIFEGQFSADSSTLV 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03708 487 CDD MATE_eukaryotic 33 469 IPR045069 GO:0042910|GO:1990961
Aip09g03708 487 PANTHER PROTEIN DETOXIFICATION 14 474 - -
Aip09g03708 487 PANTHER MULTIDRUG RESISTANCE PROTEIN 14 474 - -
Aip09g03708 487 TIGRFAM matE: MATE efflux family protein 43 440 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip09g03708 487 Pfam MatE 43 202 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip09g03708 487 Pfam MatE 264 425 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03708 Aip-Chr9 143987207 143990278 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03708 09 143987207 143990278 Aip09g03708 09 143987207 143990278 ECH