Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03707 ATGATAATGGAAGAGAATCTTCTAGCGGCAAAAGAAAGATCATCATCATGGACATGGAAGAAAGGTTACAAAGAAGAAATGAAGAGGATATGTGAGATAGCAGGGCCCATGGTGGTAGTGATAGCTTCTCAGTATCTGTTGCAGGTGGTTTCAACCATGATGGTTGGTCACCTTGGCGAGCTTGCTCTCTCAAGCTCTTCTTTGGCCATATCCCTCTCTGGTGTCACCGGTTTCAGCCTCCTTATGGGGATGGCGAGTGGACTGGAAACTATATGTGGACAGGCTTATGGAGCAGAACAATACCAAAGAATTGGAATGCAAACATACACTGCCATCTTTTCTCTCATATTGGTCTGTGTTCCCCTCTCTATTCTTTGGATCAACATTGAACAGATACTAGTCTTCCTAGGCCAGGACCCTCTCATTGCTCATGAAGTAGCCAAGTTCATCATATGGCTTATTCCAGCCCTTTTTGCATATGCAATTCTGCAGCCGTTAGTTCGATATTTCCAAATCCAAAGCTTGCTTCTTCCCATGCTTGTAAGTTCTTGTGTCACTCTATTCCTCCATATACCTCTTTGTTGGCTCTTGGTGTTCAAGGCTGGACTCAATAGTGCTGGTGGAGCAATAGCAGTTAGCATTTCAATTTGGTGCAATGTCATTTTTCTTGGATTATTCATGAGATACTCTCCATCGTGTGCAAAAACACGCGCTCCGATTTCTCTGGAGATGTTCCGAGGAGTTGGGGAGTTTTTTCGCTTTGCTGTCCCTTCTGCAGTAATGATTTGCCTTGAATGGTGGTCATATGAGTTGCTTATCTTGCTGTCTGGGCTGTTACCAAACCCACAACTTGAGACTTCAGTTTTATCTGTTTGTCTTAATACAATTTCAACTCTCTATACCATCCCTTTTGGAATTGGTGCTGCAGCAAGCACAAGAGTTTCAAATGAATTAGGAGCAGGGAAACCACTAGCTGCTCGTGTAGCCGTGCTGGCTGGAATGTCTCTTGCAGTAATTGAGACGAGTATAGTAAGCGCAACCCTCTTTTCGTGTCGCCACATTTATGGTTATGTTTTCAGCAACGAGGAGGAAGTTGTTGATTATGTCACTGTCATGGCTCCTCTGGTTTGTGTATCTGTTATACTAGATAGCCTACAAGGTGTTCTGGCAGGGATTGCTAGAGGTTGTGGATGGCAGCACTTAGGAGTTTTTGTAAACCTAGGAGCTTTCTACCTCTGTGGGATTCCGGCTGCGGCTGCGTTGGCATTTTGGGTGAATCTGAAAGGAAAAGGACTTTGGATTGGTATACAAGTTGGTGCATTTGTTCAAACTGTTCTACTTGCTACCATAACAAGCTGCATAAATTGGGAACAACAGGCAATCAAGGCAAGGAAGAGAATATTTGATGGTCAATTTTCAGCAGATAATATACTGATATGA 1440 0.4354 MIMEENLLAAKERSSSWTWKKGYKEEMKRICEIAGPMVVVIASQYLLQVVSTMMVGHLGELALSSSSLAISLSGVTGFSLLMGMASGLETICGQAYGAEQYQRIGMQTYTAIFSLILVCVPLSILWINIEQILVFLGQDPLIAHEVAKFIIWLIPALFAYAILQPLVRYFQIQSLLLPMLVSSCVTLFLHIPLCWLLVFKAGLNSAGGAIAVSISIWCNVIFLGLFMRYSPSCAKTRAPISLEMFRGVGEFFRFAVPSAVMICLEWWSYELLILLSGLLPNPQLETSVLSVCLNTISTLYTIPFGIGAAASTRVSNELGAGKPLAARVAVLAGMSLAVIETSIVSATLFSCRHIYGYVFSNEEEVVDYVTVMAPLVCVSVILDSLQGVLAGIARGCGWQHLGVFVNLGAFYLCGIPAAAALAFWVNLKGKGLWIGIQVGAFVQTVLLATITSCINWEQQAIKARKRIFDGQFSADNILI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03707 479 Pfam MatE 257 417 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip09g03707 479 Pfam MatE 36 196 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip09g03707 479 PANTHER PROTEIN DETOXIFICATION 11 466 - -
Aip09g03707 479 CDD MATE_eukaryotic 26 462 IPR045069 GO:0042910|GO:1990961
Aip09g03707 479 PANTHER MULTIDRUG RESISTANCE PROTEIN 11 466 - -
Aip09g03707 479 TIGRFAM matE: MATE efflux family protein 36 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03707 Aip-Chr9 143983240 143986189 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03707 09 143983240 143986189 Aip09g03707 09 143983240 143986189 ECH