Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03704 ATGGGAACCGTTCCGATGAACATCGCTTCCCACGTCGACCTCCGTTCACGATTCCACCTCACGTCGTCTTCATCCTCGTCGTCTTCCTCATCCTCCTCTGTGCGGGTTTCCAACTTTTCTAAAACTATCAGCTTGAGCTTCCCTCTCTCTCGGAGGAAGCAGGGGAGGTTAGGTAGGTTTCCTTGCTTCGCCGTCGATGACGACTTCAGAGTCCAGCAGCAAGACCTCGCCAATACTACTTCAGCTGCTGTTGGCTCTGCCACTGAAGAAAGACCCACCGAAAATACGGATCTGCTTCCTGGTACAAATGGAGATGCTCCAGATAATTTTAAGCAAGATGGCGAAGGAAGTGCTATCTATGATTTCCTTTATCCTAGTAAAGAGCTTCTTCCCGATGATAAAGAAATGAGCATATTTGATCATCTTGAAGAGCTGCGACAGAGAATCTTTGTATCAGTTCTAGCTGTTGGAGGAAGCATTCTCGGATGCTTTGCATTTTCGAAAGATCTGATAGTGCTTCTAGAATCTCCTGTGAAGACACAGGGTGTAAGATTTCTTCAGCTAGGTCCTGGAGAATTTTTCTTTACAACTTTAAAGGTGTCTGGATACTGTGGCCTCCTCTTGGGAAGTCCCGTAATACTGTATGAGATTATAGCCTTCATACTTCCAGGTCTCACAAAAGCTGAAAGAAAGTTTCTAGGGCCAATTGTATTGGGCTCGTCAGTTCTTTTCTATGCCGGAATAACCTTCTCCTATTTAGTTCTAACACCTGCAGCCTTAAACTTCTTTGTTAATTACGCTGAAGGTGCTGTTGAGTCGTTATGGTCTATTGATCAATACTTTGAGTTTGTCCTTGTCCTTATGTTCAGCACAGGCTTATCTTTCCAGGTACCTGTTATACAATTCCTATTGGGACAACTTGGGTTGGTGTCCGGAGACCAGATGCTATCAGTTTGGAGATATGTTGTGGTTGGAGCAGTGGTGGCAGCTGCTGTTGTTACACCCTCCACTGATCCACTCACTCAAGTTCTTCTAGCTGCACCTTTGTTGGGTCTTTACCTAGGTGGTGCATGGGCTGTCAAGCTTACAGGACGGTGA 1098 0.4563 MGTVPMNIASHVDLRSRFHLTSSSSSSSSSSSSVRVSNFSKTISLSFPLSRRKQGRLGRFPCFAVDDDFRVQQQDLANTTSAAVGSATEERPTENTDLLPGTNGDAPDNFKQDGEGSAIYDFLYPSKELLPDDKEMSIFDHLEELRQRIFVSVLAVGGSILGCFAFSKDLIVLLESPVKTQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFILPGLTKAERKFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQLGLVSGDQMLSVWRYVVVGAVVAAAVVTPSTDPLTQVLLAAPLLGLYLGGAWAVKLTGR 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03704 365 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 61 365 IPR002033 GO:0016021
Aip09g03704 365 ProSitePatterns TatC family signature. 280 299 IPR019820 -
Aip09g03704 365 MobiDBLite consensus disorder prediction 80 102 - -
Aip09g03704 365 PANTHER BNAA06G35150D PROTEIN 61 365 - -
Aip09g03704 365 MobiDBLite consensus disorder prediction 80 109 - -
Aip09g03704 365 Hamap Sec-independent protein translocase protein TatC [tatC]. 133 365 IPR002033 GO:0016021
Aip09g03704 365 TIGRFAM tatC: twin arginine-targeting protein translocase TatC 138 353 IPR002033 GO:0016021
Aip09g03704 365 Pfam Sec-independent protein translocase protein (TatC) 140 348 IPR002033 GO:0016021
Aip09g03704 365 PRINTS Bacterial Sec-independent translocation TatC protein family signature 137 164 IPR002033 GO:0016021
Aip09g03704 365 PRINTS Bacterial Sec-independent translocation TatC protein family signature 211 229 IPR002033 GO:0016021
Aip09g03704 365 PRINTS Bacterial Sec-independent translocation TatC protein family signature 229 255 IPR002033 GO:0016021
Aip09g03704 365 PRINTS Bacterial Sec-independent translocation TatC protein family signature 280 308 IPR002033 GO:0016021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03704 09 143972730 143975589 Aip09g03704 09 143972730 143975589 ECH