LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip09g03703	ATGAAGGGGGAGAATCACAAAGAGAAGGCGTTGAATCTGCTTCGAAGCAGAGTCTGTGACCCCAAATTCGCGTTCAAGGCACTCTATGATTCTCCAGAGAGCAACTATAGCAAGCTTAAATTCATGATTTCTAGTTCCGTTACTGAGGCTTGCAACAATTCCATTCTCCTTCTCGGTCCTCGCGGCTCCGGCAAGATTTCCGTGTTGGAGCTTGTCATTCGGGATTTGCTGGATGAATATCCCGAGTCAATTTCAGTGATCAGGTTAAGTGGACTTCTACATAGCGATGACATTTCAGCATTCAAGGAAATAGCTAGGCAGTTATGTATGGAGCATCAGTTACTATTCTCAAAATCGGCATCGTTTGATGACAACTCCCAATTTATGGTAGCAATGCTAAAGGAATGTGGATTAGCACATAAAACAGTCATTTTTGTTTTGGATGAGTTTGACCTCTTTGCTCAGGGCAAACAGCGGTTACTTTATAGCCTCTTGGATGCAATGCAATCAGTAACATCACAGGCTGTTGTAGTTGGCATTAGCTGTCGGCTGGATGCTGATCAGCTGTTGGAGAAAAGAGTACGATCTCGATTTTCACATAGAAAGCTGTTGTTTACTCCGCCTTCAATGGAAGACTCACAGAGCTTGCTGGTGCACATGCTTACAATACCAGTAGATTCAAGCTTTCCCCGTGATTATGCTATTGAATTTAATAGAAAGGTCCAAAATATTGTAGAAGACAAAAGGTTCAAAGAAACCTTCAGTAACTATCTAAATTTTGACTCCTCTGTTAAGCATTTGCTAAAGTTCCTATTCTGTGCTATCTCTCAAATGGATTTGAAGACTGGGTTTCTGTCCCTTGAGAACTTCAAAACCGCATTTTCAAGTATTAATAGGCAACCAAAACTGGAATGTCTAAGAAATTCCTCCATTTTAGAACTTTACATTTTGGTTTGCATGAAGAGGTTGGAAGTTAAAGAGAAAAGCTTCTGCAACTTCAATTCTGTTATGAAAGAGTATAAAAGTATACATGATTCCTTCCAGACTTCTGATTACTATGATCGAAATGTCTGCTTAAGGGCATTTGAACACCTTATAAATCGGGAATTAATATGCTTCGCAGACAATAGAGGGCATAGTTTGTCCGTTGAATATCGTCCTGTCAAGCTTTTAATCTCATCTGCTGAACTGAATCAGGGACTAAGAGCATATCATTCATGCCCCGCTATTCTTCAAAAGCTAATGGATCGTGAAGGCTAG	1260	0.4032	MKGENHKEKALNLLRSRVCDPKFAFKALYDSPESNYSKLKFMISSSVTEACNNSILLLGPRGSGKISVLELVIRDLLDEYPESISVIRLSGLLHSDDISAFKEIARQLCMEHQLLFSKSASFDDNSQFMVAMLKECGLAHKTVIFVLDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVVGISCRLDADQLLEKRVRSRFSHRKLLFTPPSMEDSQSLLVHMLTIPVDSSFPRDYAIEFNRKVQNIVEDKRFKETFSNYLNFDSSVKHLLKFLFCAISQMDLKTGFLSLENFKTAFSSINRQPKLECLRNSSILELYILVCMKRLEVKEKSFCNFNSVMKEYKSIHDSFQTSDYYDRNVCLRAFEHLINRELICFADNRGHSLSVEYRPVKLLISSAELNQGLRAYHSCPAILQKLMDREG	419

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip09g03703	419	Pfam	AAA ATPase domain	37	173	IPR041664	-
	Aip09g03703	419	PIRSF	ORC4	3	419	IPR016527	GO:0000808\|GO:0003677\|GO:0005634\|GO:0006260
	Aip09g03703	419	Pfam	Origin recognition complex (ORC) subunit 4 C-terminus	217	399	IPR032705	-
	Aip09g03703	419	Gene3D	-	32	207	IPR027417	-
	Aip09g03703	419	CDD	AAA	53	201	-	-
	Aip09g03703	419	PANTHER	ORIGIN RECOGNITION COMPLEX SUBUNIT 4	8	418	IPR016527	GO:0000808\|GO:0003677\|GO:0005634\|GO:0006260
	Aip09g03703	419	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	51	262	IPR027417	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip09g03703	1	416	Core DNA Replication Machinery Family	AT2G01120	66.194	0.0	575

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip09g03703	09	143969220	143972525	Aip09g03703	09	143969220	143972525	ECH