Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03690 ATGGAGGCGCAACCTCCAACGCCACCACACACCGCACAGCCTCCGCCGTTGTCTTCGGTGGCGCCGCCGCCACAACAACCTCAGCAACCAGCGCCGCCACCGCCGTCACACCTGAACTACCCTGACTCGGTGGACTCGTCCCCACGCTCTCGCAACACGGACTCATGGGACGAGCCCTTCCCGCCGGCGTCATCGAAGCTCCGGCTTATGTGCAGCTATGGCGGCCACATCGTTCCCCGGCCTCACGACAAGTCGCTCTGCTATGTAGGCGGCGACACTCGAATCGTGGTGGTTGAGCGAACAACTTCACTCGCGGACCTCTCCACGCGCCTCTCAAAGACGTTCCTGAATGGAAGACCGTTCAGCCTCAAGTACCAGCTCCCCAACGAAGACCTGGATTCTTTGATTTCTGTTACCACCGACGAGGACCTCGACAACATGATCGACGAGTATGACCGAACCAACAACAACCCTTCCGTGAAACCCTCGCGAATTCGGCTCTTTCTCTTCCCAACAAAGCCTGAATCGGTTCAAAGTATTCCGCCCATTCTAGAAAGTTCCGCCAAGTCTGATGATTGGTTCCTCAACGCCCTAAACGGCTCTGGATTGCTCAACCGGGGTTTCTCTGACTCTGCCTCTGTGAATTGCCTTTTGGGTCTCGACGACGATGCTTCGGGGAATAATGTTGACCATAGCTCAAGGGACCCTGTCGAGGCTTCTTCTCAGCCTGGATCTTTTGGAAACGGCAAGAATCCGAAACAGGAGGTTCATTCTGTTCCCGATTCGCCCATGCTGGAGACTACTTCTTCGTTTGGCTCTACTTCTTCATCGCCGTCGCTGGCCAATTTGCCGCCGATTAGGGTTCATGTGGAAGATGGCAGCGGTGGCGGCGGGGTTAGGATGGTGCAGGATCACAAGGTTTTGGGAATTGAGGAGCAGTTTGCGCAGATGGGTGTGAGTGTTGCCGGTGGATTGGGGCAGAAGCAAGACGAGGGGCTGGTGGTGCTTTCTTCGCCTCCGCCTCCGCCTGTGCCGGTCACTCTATCTGCCGCTGGGGTGGGTGTGCCTGTTAGCTCAGCGCTGGTGGCTGGGGAGTACCAGAACAGGGTTTTCTCCGATGATGAGAGATCGGATCATGGCGTGCCTGTGGGTTACAGAAAACCACCGACACCTCAGCCACAGTTGCAGCAACAACCACAGCAACAACCACAGCTTCAGCCTCAGCCTCAGCCGCAGCAAACACAGTCACAGTCACAACCTCAACATCAACAGGTTTTACAGCCTCAATTTCAACCGAAGTCAACTGGCGTCGTTGATTTGCCTTCTCCAGATTCAGTTTCAAGTGATAGTAGTCTTTCAAATGCAATCTCTCGGCAAAAAGCTGTGATCTATCAAGACCAAGTTCAGATTCAGCCTGGGACTACAAGGGTTCCTAGTAACCCGGTTGATCCAAAACTAAACGTGTCCGATCCTCATGGTCGGATCCAGATGCAGCAGCTTGTACAGGACCCAGGATACTTGTTGCAACAGCAATTTGAACAACAGCCGCCGCAGCAGCAGCCTCAACAGCAACAACAGCAGCAGTTCATTCATGGTACTCATTTCATTCACCATGCTCCTCCTGGGGCCGTGCCGATATCCGCCTACTATCCAGTATATCCTTCCCAGCAACAGTCCCACCACCAGGTTTACTACGTTCCTGCGAGACAGCCCCCGGCTTACAACATGCCTGTTCAGCAGCCTAACATGGCTGAATCCGCCTCAAGCATTCCTTCCAGCCGTCCCCAGACTCCGCCAAATCCCACCACATTGGTTCCACCTTCTGCAGCTTACAACCCCATGAGAAATGCTCCCATGCCCAAGACTGAAATGACGGCAGCTGCATACAGAGCTGTGAGTGCCGGTACCCCTCAATTGGTTCAAGTTCCTACCAGTCAGCATCAGCAACAGTATGTTGCTTACTCCCAGATTCACCACCCTTCTCAGTCTATTGCTCAAAATTCTGCTCCCCCTCATAATTATGCTTTTGATTATGCGGATCCGGCACATGCTCAGATATACTACTCTCAACCTCTGGCACCCTCAATGCCTTCTCAGTACCAGACCATGACAGCCGCTGCCATGGTAATGCCGGACGGTTCCACTCAGCAACCCTCGGACAACATGAAGCAACAGATAAGAACTTCACAGCCATTATAA 2199 0.538 MEAQPPTPPHTAQPPPLSSVAPPPQQPQQPAPPPPSHLNYPDSVDSSPRSRNTDSWDEPFPPASSKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVERTTSLADLSTRLSKTFLNGRPFSLKYQLPNEDLDSLISVTTDEDLDNMIDEYDRTNNNPSVKPSRIRLFLFPTKPESVQSIPPILESSAKSDDWFLNALNGSGLLNRGFSDSASVNCLLGLDDDASGNNVDHSSRDPVEASSQPGSFGNGKNPKQEVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVEDGSGGGGVRMVQDHKVLGIEEQFAQMGVSVAGGLGQKQDEGLVVLSSPPPPPVPVTLSAAGVGVPVSSALVAGEYQNRVFSDDERSDHGVPVGYRKPPTPQPQLQQQPQQQPQLQPQPQPQQTQSQSQPQHQQVLQPQFQPKSTGVVDLPSPDSVSSDSSLSNAISRQKAVIYQDQVQIQPGTTRVPSNPVDPKLNVSDPHGRIQMQQLVQDPGYLLQQQFEQQPPQQQPQQQQQQQFIHGTHFIHHAPPGAVPISAYYPVYPSQQQSHHQVYYVPARQPPAYNMPVQQPNMAESASSIPSSRPQTPPNPTTLVPPSAAYNPMRNAPMPKTEMTAAAYRAVSAGTPQLVQVPTSQHQQQYVAYSQIHHPSQSIAQNSAPPHNYAFDYADPAHAQIYYSQPLAPSMPSQYQTMTAAAMVMPDGSTQQPSDNMKQQIRTSQPL 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03690 732 MobiDBLite consensus disorder prediction 261 282 - -
Aip09g03690 732 Pfam PB1 domain 82 171 IPR000270 GO:0005515
Aip09g03690 732 Gene3D - 86 170 - -
Aip09g03690 732 MobiDBLite consensus disorder prediction 708 732 - -
Aip09g03690 732 MobiDBLite consensus disorder prediction 369 453 - -
Aip09g03690 732 MobiDBLite consensus disorder prediction 575 593 - -
Aip09g03690 732 PANTHER EXPRESSED PROTEIN 31 723 - -
Aip09g03690 732 SMART PB1_new 81 172 IPR000270 GO:0005515
Aip09g03690 732 MobiDBLite consensus disorder prediction 40 59 - -
Aip09g03690 732 MobiDBLite consensus disorder prediction 225 292 - -
Aip09g03690 732 MobiDBLite consensus disorder prediction 397 453 - -
Aip09g03690 732 PANTHER OS05G0427100 PROTEIN-RELATED 31 723 - -
Aip09g03690 732 SUPERFAMILY CAD & PB1 domains 82 180 - -
Aip09g03690 732 CDD PB1_UP2 70 170 - -
Aip09g03690 732 ProSiteProfiles PB1 domain profile. 66 172 IPR000270 GO:0005515
Aip09g03690 732 MobiDBLite consensus disorder prediction 470 490 - -
Aip09g03690 732 MobiDBLite consensus disorder prediction 1 39 - -
Aip09g03690 732 MobiDBLite consensus disorder prediction 575 611 - -
Aip09g03690 732 MobiDBLite consensus disorder prediction 1 61 - -
Aip09g03690 732 MobiDBLite consensus disorder prediction 230 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03690 Aip-Chr9 143745662 143748435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03690 43 200 MAP Kinase Kinase Kinase AT3G46920 35.542 1.00e-25 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03690 09 143745662 143748435 Aip09g03690 09 143745662 143748435 ECH
Aip09g03690 09 143745662 143748435 Aip05g03029 05 132814036 132816559 ECH