Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03676 ATGGCTCCACTTCATTTCTTGTTCTTTTCCTTCTTGTTTTCTCTCATTCTACTGATTGTTACTGCTGGGAACCATGAAAACTGTCCAAGCTCCTTTACTTGTGGAAAACTTGGGACTTTCCGGTACCCATTCACCATGGCAGAGCATCCTGAGTGTGGGTTGTTACCAATTCAAGGCTGCCTCCTCAGTGCTACTTCACCAAAATTGATCCAACTTGGCAACAATAGCAAAAGCGTGAACCTTACTGCTGTAGTTGAGACCAATAAGATCATTACAATCTATGATGATGGCTTCCACACAAGTTTGGATCACAACAAATGTGACACTTTGCACAATAATTACACCCTTCCTCCACCTTCTCCATTTTTGTCTATGTATATCAAGTACAATGTAACTCTCTTCAAATGCAATCACAACCTTAGTACCAAGCCCCCTTCCAATTATGTTAATCTAGGATGCCGCGTCTCCTACGGCTATGAAATCTATTATGATAGATCCAATACCAATCCTGATCAAGAGGCGGCCGGAGTTTTTTCCGGCTGCTCGGTTGTCCAGTTTGCTTCAAAAGACTCCACCAATACCAAAGACGTTTTGTCCTTCGTTTCTGCTGAGATGGTTCTTGAAATAGTATTATCTCATGACTGTGATGACTGCTTCAATCACAGAGGAGGCCTTTGTAGACTTGACAACAATAACCACTTTTACTGCCACTTAGTGCCAAAGGATAACAATAAAGCCTTGAAGCTCGGAGTCGGAATAGGTTTAGGTATGAGTACACTGCTAGGACTTTTGATCATTGGATGCTTCCTCAGACGACGTTATAGAAGAAAAGATGTTCCTTCAGAACTCCCATACCAATCAAAAAGCACATACAGAGATGTAAACTATGCATCTACAAATCCAGAGGCAGAAAGCAAGAGGGGCTACTTTGGAGTCCCTCTCTTCTCTTACAAGGAGCTCAAAGAAGCTACAAATAATTTCCACCACACGAGCCAACTTGGAAAGGGAGGATTCGGAACAGTTTACTATGGAAAACTGCGAGATGGACGGGACATTGCCGTAAAGCGCCTTTACGAGCACAACTACAGGAGAATGGAACAGTTTATGAATGAAATCGATATCCTTGCTCGCTTGCGCCATAAGAACCTAGTATCCCTTTACGGCTACTGCACTTCACCCCACAGCCGTGAATTACTGCTTGTGTATGAGTTTGTTCAAAACGGCACGGTGGCTTCTCATATCCACGGTGATTTTACACGGACTACCACACTGCCATGGCATATAAGAATGAAGATTGCCATAGAGACCGCCACTTCATTGTCTTATCTTCATGCCTCTGACATAATCCACCGCGATGTCAAAACCAACAACATTCTTCTTGACAACCACTTTTGTGTTAAGGTTGCGGATTTCGGCCTTTCAAGACTGTTCCCCAATGATGTCACACATGTCTCCACAGCACCACAAGGGACTCCGGGTTATGTTGACCCTGAATACCACCGCTGCTACCAGCTTACTAGCAAGAGTGATGTTTATAGTTTCGGAGTGGTGCTCATTGAGCTTATATCTTCTAAGCCTGCTGTTGACATGGACAGGCATAGGGATGAGATTAATTTGTCTGATTTAGCCATAAACAAGATTCAAAACGGTGCATTGAGTGAGCTGGTTGATCCTACTCTTGATTTTGATTCGGATAATGAGGTTAAGAGGATGATAGTGTCAGTGGCAGAGCTGGCTTTTCAGTGTTTGCAACGGGATAGGGAACTGAGGCCTACCATGGATGAAGTTTTGAAGCTGTTGATCACAATTGAATGTGGGAAGGCAAAAGATGAACATATTGAGGAAGTAGATTTACATCCATCATCATCCCCATCCCCAGCTTCACCAGATTTGGATGAAGTTGGATTATTGAAGAACAGGATTCTACTGCCTTCACCAAAAGCAGTGACTGATAGATGGAATAGTGAATCAACTTCATCTAATGTCAGTGGTTAA 1995 0.4311 MAPLHFLFFSFLFSLILLIVTAGNHENCPSSFTCGKLGTFRYPFTMAEHPECGLLPIQGCLLSATSPKLIQLGNNSKSVNLTAVVETNKIITIYDDGFHTSLDHNKCDTLHNNYTLPPPSPFLSMYIKYNVTLFKCNHNLSTKPPSNYVNLGCRVSYGYEIYYDRSNTNPDQEAAGVFSGCSVVQFASKDSTNTKDVLSFVSAEMVLEIVLSHDCDDCFNHRGGLCRLDNNNHFYCHLVPKDNNKALKLGVGIGLGMSTLLGLLIIGCFLRRRYRRKDVPSELPYQSKSTYRDVNYASTNPEAESKRGYFGVPLFSYKELKEATNNFHHTSQLGKGGFGTVYYGKLRDGRDIAVKRLYEHNYRRMEQFMNEIDILARLRHKNLVSLYGYCTSPHSRELLLVYEFVQNGTVASHIHGDFTRTTTLPWHIRMKIAIETATSLSYLHASDIIHRDVKTNNILLDNHFCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYHRCYQLTSKSDVYSFGVVLIELISSKPAVDMDRHRDEINLSDLAINKIQNGALSELVDPTLDFDSDNEVKRMIVSVAELAFQCLQRDRELRPTMDEVLKLLITIECGKAKDEHIEEVDLHPSSSPSPASPDLDEVGLLKNRILLPSPKAVTDRWNSESTSSNVSG 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03676 664 Pfam Protein kinase domain 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03676 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Aip09g03676 664 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 7 664 - -
Aip09g03676 664 SMART serkin_6 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03676 664 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 664 IPR044652 -
Aip09g03676 664 ProSiteProfiles Protein kinase domain profile. 327 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03676 664 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Aip09g03676 664 CDD STKc_IRAK 333 600 - -
Aip09g03676 664 SUPERFAMILY Protein kinase-like (PK-like) 310 605 IPR011009 -
Aip09g03676 664 Gene3D Transferase(Phosphotransferase) domain 1 405 615 - -
Aip09g03676 664 Gene3D Phosphorylase Kinase; domain 1 298 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03676 Aip-Chr9 143608699 143624632 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03676 32 664 Receptor kinase-like Gene Family AT1G25390 50.313 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip09g03676 Pkinase 1.1e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03676 09 143608699 143624632 Aip09g03676 09 143608699 143624632 ECH
Aip09g03676 09 143608699 143624632 Aip04g03797 04 132235998 132243397 ECH