Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03673 ATGCATCCATTGAAATTGGTGTCGATGCTCAATGCGGCGTTTGCAATAGGCTCAACCAATTGCGCCGCTGAGATCTTGTTCGCGGGAAAGAACACGATAGAAGCCGGAGAGGAGAACCCACATGGACACCAGGGGGCTCTTGTGGTCGCCGCTGCCGTCGGCCTTTCTGGCGAGTGCTATGGTGAGGGCGAGGAGGATCCAGGCCGCGACGTCATTAAAGGCGGCGGCGGCCATGGCAGTCTTGGGCTGCGCAATGGACGCAATGTGTGCAAAGAAGACTGCATTTTGCCATGGTTAATGGCTCCGCCTTTTACACTTATATCATCACTGGTTATTTTGTGCAAGTATGTGGTTCTTGTCATGGCACAAGAAGACAAGTGTCCACCCTCTTTTAAGTGTGGGGAACTTGGCACCATTGGCTTCCCTCTCACAACCACGCAGCACCCACACTGCGGTGTATTGCCAATCCATGGCTGCAAAGATCCAAATGCCAACAAAACAATTCAACTAACACATCTTCCAACAACAAGCAGGTTCGTTGTCAAATCCGTGAACCACAACAATGCCACAATAATCGTCAGAGATGAGACTCTACGTGATTATTTGCGATCTAAAAGCTGCAAAACCTTCAGTAACAATTATTCTCTTGCTCTCAGTCTCAGCTCTCCTTTAGGATCCGTACGCATAGTGAACAATGTAACCCTCTTCAGATGCAACCATTCCGTGAATGTCAGCGTCACCATTCCTCATAATATCTATAACTATACAGAGTGTAATGAGTACAGTGTCTACTATGGGCCCCCAATTGGGAATCCACAGGGCTTCAGTGCTGGCCCATTAGCGGCTTGCTCCAAAATTCAGTTAGCATTAAAGGACAACTCAGATACTTCTGACCCCTTTTCATTTCTATCTGATAACATCCTCATCCACGTGCTTTTATCTGACGATTGTACAAAGTGTATTGCTCATACAAGAGGCCACTGTCAACTTGACATCCATGGAAAATTCTTTTGCCTCAGACTCAGAGATCGAAATTTGCCTTGGAAGCTAGCACTTGGTATTGGACTCCCAGGCTTCATTATAATTGTCTTGCTGCTGTTTATATGGCTTCGGAAACCAAAAAGCGGCCCTGATTTCCACTCAAATCCGCAAGAAGCAGAGACAGAAAGTGACAAGGTCTACTTTGCGGTGCCTGTGTTCTCCTATAAGGATCTTCAAGTGGCCACAAAATATTTTGACAATTCTGGATTAATTGGAGATGGAGGCTTTGGAACTGTTTACTACGGAAAACTGAGAGACGGACGTGAAGTTGCCATCAAGCGCCTCTATGAGCACAACTACAGGCGAGCAGAACAATTCATGAACGAAGTTCAGATCCTAACCCTCGTGCGACACACAAATCTGGTGTCTCTCTATGGCTGCACTTCACGCCACAGCCGCGAACTCTTACTTGTCTACGAATATGTTTCCAATGGCACTCTTGCCTGTCATATCCACGGCGAATCAGCGAAGCGCAGCTTCCTACCTTGGTCTACAAGAATCAAAATCGCCATAGAGACTGCTACTGCATTGGTTTATCTCCATGCTTCTGATATCATCCACCGTGATGTGAAGACAAACAACATTCTCCTTGACAAGTGTTACAGTGTTAAGGTTGCTGATTTTGGGCTTTCAAGACTATTCCCCAATGATGTAACCCATGTTTCCACAGCACCACAAGGGACTCCGGGTTATGTTGATCCTGAATATCACCGCTGCTACCAGCTTACTAGCAAGAGTGATGTTTATAGTTTCGGAGTGGTGCTAGTTGAGCTTATATCTTCTAAGCCTGCTGTTGACATGAACAGGGATAAGGATGAGATTAACTTGTCTGATCTAGCCATAAATAAGATTCAAAACTGCGCATTGAGCGAGCTGGTAGATCTTTCTCTTGGTTTTGATTCAGACATTGAGATTAAGGATAAGATAGCTTGGGTGGCAGAGTTGGCTTTTCAATGTTTGCAACGGGACAGAGAATTGAGACCTTCCATGGAAAAGGTTTTGAAGATGCTGATCAAAATTGAAAGTGGGATGGGTAGAGATGAACATATGATTGAAGAAGTAGATGTGCATCCACCACCATCATCTCCGTCTTCGCCAGATTTGGATGAGAATGAGATTGAAGTATTTGAAACCATGGTACTGCCGCCTTCACCAAAAGTCCTCACTCATACATTAAAGGAAAATTAG 2229 0.454 MHPLKLVSMLNAAFAIGSTNCAAEILFAGKNTIEAGEENPHGHQGALVVAAAVGLSGECYGEGEEDPGRDVIKGGGGHGSLGLRNGRNVCKEDCILPWLMAPPFTLISSLVILCKYVVLVMAQEDKCPPSFKCGELGTIGFPLTTTQHPHCGVLPIHGCKDPNANKTIQLTHLPTTSRFVVKSVNHNNATIIVRDETLRDYLRSKSCKTFSNNYSLALSLSSPLGSVRIVNNVTLFRCNHSVNVSVTIPHNIYNYTECNEYSVYYGPPIGNPQGFSAGPLAACSKIQLALKDNSDTSDPFSFLSDNILIHVLLSDDCTKCIAHTRGHCQLDIHGKFFCLRLRDRNLPWKLALGIGLPGFIIIVLLLFIWLRKPKSGPDFHSNPQEAETESDKVYFAVPVFSYKDLQVATKYFDNSGLIGDGGFGTVYYGKLRDGREVAIKRLYEHNYRRAEQFMNEVQILTLVRHTNLVSLYGCTSRHSRELLLVYEYVSNGTLACHIHGESAKRSFLPWSTRIKIAIETATALVYLHASDIIHRDVKTNNILLDKCYSVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYHRCYQLTSKSDVYSFGVVLVELISSKPAVDMNRDKDEINLSDLAINKIQNCALSELVDLSLGFDSDIEIKDKIAWVAELAFQCLQRDRELRPSMEKVLKMLIKIESGMGRDEHMIEEVDVHPPPSSPSSPDLDENEIEVFETMVLPPSPKVLTHTLKEN 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03673 742 ProSiteProfiles Protein kinase domain profile. 412 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03673 742 SMART serkin_6 412 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03673 742 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 111 698 - -
Aip09g03673 742 SUPERFAMILY Protein kinase-like (PK-like) 393 688 IPR011009 -
Aip09g03673 742 Gene3D Transferase(Phosphotransferase) domain 1 489 698 - -
Aip09g03673 742 Pfam Protein kinase domain 414 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03673 742 ProSitePatterns Protein kinases ATP-binding region signature. 418 440 IPR017441 GO:0005524
Aip09g03673 742 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 111 698 IPR044652 -
Aip09g03673 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Aip09g03673 742 Gene3D Phosphorylase Kinase; domain 1 382 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03673 Aip-Chr9 143598093 143602047 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03673 131 736 Receptor kinase-like Gene Family AT1G25390 45.968 1.15e-161 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip09g03673 Pkinase 3.2e-49 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03673 09 143598093 143602047 Aip09g03673 09 143598093 143602047 ECH