Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03672 ATGGCTCCCTTTCTTATATTCAGATTACTGATTTCGTCTACGCTTCTTCTTCTTCTTGCCATGGCTGACGATGGAGAGTGTCCATCCTCTTTCCAGTGTGGGAGTTTTGGAACCATCAAGTTTCCTTTCACAGACTCACGACACCCACACTGCGGCGTGATGCCAATCCATGGCTGTGATGATCCAAATCCAGATGCCCTCAAAACCATTCAACTAACCAACACAACAACGTTTACTGTTTTATACGTGGAACCTCATACCATAACCATCAAAGATATTAATCTCTATTATTATTTGAGATCCAAAAGTTGCAAAACATTCAGCAACAACATAACTCTTCCTCGGATTCCCACCTCTCCATTAGGCTCTTTCTACATTAAATATAATATAACCCTCTTCAGATGCAACAAGTCCCTCACTCTCAACCTTCCGCGGCGTTTTCATAACTATAGAGTGTGTCCAGATTATAATATCTACTATGGCCCTCCAAATGAGGAAATTCCTAAGGGATTCCAGTGGCCAACCAATTTAACAGCATGTTCCAATATTCAGTTACCATTAAAAGATGAGTCAGATACTAGTGACCCATTTTCGTTTCTATCTGATGAGATGCAATTGGAAGTACTATTATCTGATGACTGTGCCAACTGTGTTCAGCACCAAAGTGGTCAATGTCAACTTGACACCCAAGGCAAATTCTATTGCGCCAAAAGTAAGCACTTACCACTATACACCGTTGAAAAGTTCAAATTACTCTTTGCAGGTATTGGAATCTCGGTAATAATTATAATCGGCGTGTTGCTGATTATATGGAGTAGGAAAGCCAGATGCGGTGTTGGTTTGTCCCCAAATACAGAACCAGAGAGCTGCAGTGTCTTCTTTGGGATCCCTGTCTTCTCCTATAAGGATCTTGAACTCGCAACAAAATATTTTGATCGTTCCAGAGTACTTGGTGATGGAGGCTTTGGCACTGTTTACTATGGAAAACTAAAAGATGGACGTGAAGTTGCCATCAAGCGCCTATACGAGAACAACTATAGGCGTGTAGAACAATTCATGAATGAAGTTAAGATCTTAACTCGCTTGCGACATGCAAATCTTGTGTCCCTCTATGGCTGCACTTCACGTCACAGCCATGAGCTCCTGCTTGTTTATGAATTCATTTCAAACGGCACAGTAGCTAGTCATCTCCATGGTGGATCAGCAAGGCCTGCCTTTCTGCCTTGGCATATCCGAATGAAAGTTGCCATAGAGACTGCAACAGCATTGGCATATCTCCATGCTTCAGACATCATTCACCGCGATGTGAAGACCAACAACATTCTCCTGGACAACAACTTTTGTGTTAAGGTTGCAGATTTCGGGATGTCAAGACTGTTCCCGAATGACGTCACACATGTATCCACAGCTCCACAAGGCACCCCTGGCTATCTTGATCCAGAATATCACCAATTCTACCAGCTAACAAGCAAGAGTGATGTGTATAGTTTCGGAGTTGTGCTCATTGAGTTAATATCATCCATGCCAGCAATTGATATGAGAAGGCATAAGGATGAGATTAGCTTGGCAAATCTAGCCACAAACAAGATTAGCAAAGGTGCAATTGCAGAGTTGGTTGATCCTTCCCTTGGTTTTGAGTCAGATAGTGATGTTAGAAGGGGAGTAAATTTGGTAGCTGAATTGGCATTTCAGTGTTTACAAAGGGACAGGGACTTGAGGCCCTCAATGGATGCGGTGTTGGAGGCACTGAAGAGAACAGAGAGTAAAAAGGAAGAGGCTGAGGTGTCACATGGTGATGCGCATTCAGCAGCAGATCATGAAGAAATGAAAGTGTTGAATCAAATGAATGCAACACCTTCATCTTCTCCAACGGCAGTGACTGATAAGTGGGATAGTGAATCTACTACTACACCACCTAGTGTCACTGCTCAATCACGTATTCAATCTAAAAATAGGATCCTATTTTATAGAAGTTCTTAA 1980 0.4232 MAPFLIFRLLISSTLLLLLAMADDGECPSSFQCGSFGTIKFPFTDSRHPHCGVMPIHGCDDPNPDALKTIQLTNTTTFTVLYVEPHTITIKDINLYYYLRSKSCKTFSNNITLPRIPTSPLGSFYIKYNITLFRCNKSLTLNLPRRFHNYRVCPDYNIYYGPPNEEIPKGFQWPTNLTACSNIQLPLKDESDTSDPFSFLSDEMQLEVLLSDDCANCVQHQSGQCQLDTQGKFYCAKSKHLPLYTVEKFKLLFAGIGISVIIIIGVLLIIWSRKARCGVGLSPNTEPESCSVFFGIPVFSYKDLELATKYFDRSRVLGDGGFGTVYYGKLKDGREVAIKRLYENNYRRVEQFMNEVKILTRLRHANLVSLYGCTSRHSHELLLVYEFISNGTVASHLHGGSARPAFLPWHIRMKVAIETATALAYLHASDIIHRDVKTNNILLDNNFCVKVADFGMSRLFPNDVTHVSTAPQGTPGYLDPEYHQFYQLTSKSDVYSFGVVLIELISSMPAIDMRRHKDEISLANLATNKISKGAIAELVDPSLGFESDSDVRRGVNLVAELAFQCLQRDRDLRPSMDAVLEALKRTESKKEEAEVSHGDAHSAADHEEMKVLNQMNATPSSSPTAVTDKWDSESTTTPPSVTAQSRIQSKNRILFYRSS 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03672 659 ProSiteProfiles Protein kinase domain profile. 311 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03672 659 MobiDBLite consensus disorder prediction 611 646 - -
Aip09g03672 659 Gene3D Phosphorylase Kinase; domain 1 284 387 - -
Aip09g03672 659 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Aip09g03672 659 Coils Coil 576 596 - -
Aip09g03672 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Aip09g03672 659 Pfam Protein tyrosine and serine/threonine kinase 314 581 IPR001245 GO:0004672|GO:0006468
Aip09g03672 659 SMART serkin_6 311 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03672 659 MobiDBLite consensus disorder prediction 613 646 - -
Aip09g03672 659 SUPERFAMILY Protein kinase-like (PK-like) 288 583 IPR011009 -
Aip09g03672 659 Gene3D Transferase(Phosphotransferase) domain 1 388 601 - -
Aip09g03672 659 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 1 646 - -
Aip09g03672 659 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 646 IPR044652 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03672 Aip-Chr9 143586120 143591769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03672 31 643 Receptor kinase-like Gene Family AT1G25390 46.142 1.80e-160 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip09g03672 PK_Tyr_Ser-Thr 1.7e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03672 09 143586120 143591769 Aip09g03672 09 143586120 143591769 ECH