Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03668 ATGTATAAATTTGTTGTATTGGTTTTCATACTTGTGGTGGCCGCAGCCACCGGAGAGAGAAGAGAATGTCCAGCTTCATTCAATTGTGGAGATAATATTGGGAACTTCAGCTTCCCTCTCACTACAGCAGAGCGTCAGGAGTGTGGCCTTTTGGCCATAAACAATTGTTATGAGCCAGCGCAGGTGGATAGATGGGTGCAACTAAGTGATGAAGGCAAAACATTTTTAGTTATACGTGTATCTCAACAGAATTTTACTAGTATTCAATTCAGAGATAAGGACTTATACGATCTTCTGCAATCAAGAAATTGTAATGCCTTCAGATATAACTATACTCTTTCTACTCCTCCCACCTTTCATCATTTTGCTTCCCTTTATATGGAATACAATACAACCCTCTACACATGCAACCGTACCCTCCATTTCCCCCCAACTAGGAACATGTTCAGTTATGCAAATTGCACTGGCATCGATATCTACTACGGCCTTTTCATGCGCACACCACAAATTCAGAGTTCGTTGGCCTCATGCACAAAGGTCTTGCTTCCAATCAAAGATGTTCCTGATGGCAATGATCCCTTCACATTCGTAAATGCTGATATCAATGCTAAGGTCATTTTGTCGCAAGAATGCACAGACTGTCACTATAAGCAAAGAGGCCAGTGCCAACTTGACAGCAAAAGCAAATTTTGTTGTGCCAACGTTAGGCACACGGAAAACACAAGCACAACGATGACAGCTACTCTAGTTCTAGTAATAATGACGCTCTACTACAAAAGATGGAAGAAGCAAAATCCAACCCTTCCACTGGTTGATGCTTTTTTTGAGAGACATGACCACCTTCAAATCAAGAGGTATAGTTATTCTGAGATGAAGAAAGTGACCAATTCCTTCAAAAACAAACTAGGCCAAGGGGGGTTTGGCAGTGTATACAAAGGACAATTACAGGACGGACGCCATGTTGCAGTGAAGATCCTAAGTGAATTTAAAGGTGATGGTCAGGAGTTCATTAATGAAGTTGCAAGTATGAGCAGAACTTCTCATGTTAACATCGTTGCTCTTCTTGGCTTCTGCTTTGAAGGATCTAAGCGAGCTTTAGTTTACGAATTGATGCCTAATGGGTCTCTAGAGAAGTTAATTTATAATGAAAATGCTGTGATAGGGGATCGCCAATTGGATTGTCAAACTTTATATGATATTGCAATTGGTGTTGCCCGAGGACTTGAGTATTTGCACAAGGGCTGCAATACAAAAATCCTGCATTTTGACATAAAGCCTCATAACATTTTGTTAGATGAAAAATTCTGTCCCAAAATTTCTGACTTCGGACTTGCAAAAGTTTGCACAAGAAAAGAAAGTATAGTATCGATATTTGGTGCTAGAGGAACTGCAGGCTATATTGCCCCGGAGGTATTTTCTAGAAACTTTGGTGCAGTATCACATAAGTCAGATGTTTACAGTTATGGAATGATGGTCTTAGAAATGGTTGGAAGAAGAAAGAACATCAAGGCTGAAGTTGATGTATCTAGTGAGATATATTTCCCTCATTGGATATACAATCGCCTTGTGTCAAATCAGGAGCTTGATCTGCAAAACATAAGAAATGAATGTGATAATGAGATGGTCAGAAAGATGACAATAGTGAGTTTATGGTGCATTCAAACCAATCCTTCAACTCGACCATCAATCAGTAAGGTGGTGGAAATGTTGGAAGGAAGTGCTGAGTTGTTGCAATTGCCTCCTAAACCATATTGGTTTTCTCCTTCAAACTCTCCCTGA 1779 0.4008 MYKFVVLVFILVVAAATGERRECPASFNCGDNIGNFSFPLTTAERQECGLLAINNCYEPAQVDRWVQLSDEGKTFLVIRVSQQNFTSIQFRDKDLYDLLQSRNCNAFRYNYTLSTPPTFHHFASLYMEYNTTLYTCNRTLHFPPTRNMFSYANCTGIDIYYGLFMRTPQIQSSLASCTKVLLPIKDVPDGNDPFTFVNADINAKVILSQECTDCHYKQRGQCQLDSKSKFCCANVRHTENTSTTMTATLVLVIMTLYYKRWKKQNPTLPLVDAFFERHDHLQIKRYSYSEMKKVTNSFKNKLGQGGFGSVYKGQLQDGRHVAVKILSEFKGDGQEFINEVASMSRTSHVNIVALLGFCFEGSKRALVYELMPNGSLEKLIYNENAVIGDRQLDCQTLYDIAIGVARGLEYLHKGCNTKILHFDIKPHNILLDEKFCPKISDFGLAKVCTRKESIVSIFGARGTAGYIAPEVFSRNFGAVSHKSDVYSYGMMVLEMVGRRKNIKAEVDVSSEIYFPHWIYNRLVSNQELDLQNIRNECDNEMVRKMTIVSLWCIQTNPSTRPSISKVVEMLEGSAELLQLPPKPYWFSPSNSP 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03668 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Aip09g03668 592 SUPERFAMILY Protein kinase-like (PK-like) 279 571 IPR011009 -
Aip09g03668 592 Pfam Protein kinase domain 299 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03668 592 SMART serkin_6 296 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g03668 592 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 3 592 - -
Aip09g03668 592 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Aip09g03668 592 Gene3D Phosphorylase Kinase; domain 1 273 370 - -
Aip09g03668 592 Gene3D Transferase(Phosphotransferase) domain 1 371 582 - -
Aip09g03668 592 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 592 IPR045874 GO:0004672
Aip09g03668 592 ProSiteProfiles Protein kinase domain profile. 296 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03668 Aip-Chr9 143513093 143554041 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03668 2 583 Receptor kinase-like Gene Family AT5G38260 38.179 1.01e-127 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip09g03668 Pkinase 1.2e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03668 09 143513093 143554041 Aip09g03668 09 143513093 143554041 ECH