Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03661 ATGTCAGCGAGGATGAAGCAAAACGccgaaaccaacggtgcggagagtaaaactccaaagtaccaagatatAAAGCTAGCTCTCAAGTATCACCCTGACAAGAATGCCAGCAATCCTGAAGCGTCAGAACTATTTAAAGAGGTTGCTTATTCTTATAGTATCTTGTCCGACCCGGAGAAGAGAAGGCAGTATGATAGTGCAGGATTTGAGGCACTTGATGCTGATAGCATGGACATGGAAATTGACTTGTCTAATCTAGGGACAGTCAACACAATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCTATCAAGACAACCATTTCAGCTAATGTTCTTGAGGAAGCTCTGAATGGGACAGTTACAGTCAGACCGCTTCCTATTGGAACATCAGTGAGCGGAAAGGTAGAGAAGCAATGTGCTCACTTTTTTGGTGTGACAATAAATGAGGAGCAAGCTGAGTCAGGGATTGTAATAAGAGTTACTTCAACTGCACAAAGCAAATTCAAGTTACTTTACTTTGAACAAGATGCAAATGGTGGCTATGGTTTAGCACTGCAGGAAGATAGTGAGAAAACTGGCAAGGTGACATCTGCCGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGATTCAACCATGAATGCGTTAGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCGGAACTAAAGCCTGGCACCCATATATTTGCTGTTTATGGGGATAACTTTTTTAAGACTGCTAGCTATACAATTGAGGCAGTATGTGCAAAATCATATGAAGATACCACCCAGAAACTTAAGGACATTGAGGCTCAGATTTTAAGAAAGAGGAATGAGCTACGCCAATTTGAAGCAGAATATAGAAAGGTTACTATTTGCTTTACTCAATCGTGGCTTATGGTTTGTCTTGAGATCCTTACAGTATTTTGTCTCTTAATTGATTTTCAGGCATTGGCTCGCTACCAGGAAGTGACAGAGAGATATGCAAAAGAAAAACAATCTGTAGATGAGCTTCTGAAACAAAGAGACGGCATCCATTCATCCTTCACGATTGTCAAATCAACCAATGTTAGCGGGACTGCTAGTAATTTAAGCAATGGAAGCTCTAGCAAAGTTTCTGGTGATGAATCCAAAGGTGATAGCCCCGGGGAAGATGGAGGGTCGGATGGGAAGGACAAATCGGCCAAGAAGAAATGCTTGAGTGTCAATGATGGCATGGCCACAAACACAGCAGCCTGCAGTGTATCTTCTGGAATATTTTTGTTTTTCTTGGTTGGTGGTTTTTTAACCAGTGAGATTCATATCATCCAATTCCCTTGTAGCTTCCTCAACACAAACATAGTTTTGATATTGTAA 1398 0.3999 MSARMKQNAETNGAESKTPKYQDIKLALKYHPDKNASNPEASELFKEVAYSYSILSDPEKRRQYDSAGFEALDADSMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEEQAESGIVIRVTSTAQSKFKLLYFEQDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTMNALAMAKDPEGAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEAVCAKSYEDTTQKLKDIEAQILRKRNELRQFEAEYRKVTICFTQSWLMVCLEILTVFCLLIDFQALARYQEVTERYAKEKQSVDELLKQRDGIHSSFTIVKSTNVSGTASNLSNGSSSKVSGDESKGDSPGEDGGSDGKDKSAKKKCLSVNDGMATNTAACSVSSGIFLFFLVGGFLTSEIHIIQFPCSFLNTNIVLIL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03661 465 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 330 417 - -
Aip09g03661 465 Coils Coil 335 355 - -
Aip09g03661 465 Coils Coil 273 300 - -
Aip09g03661 465 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 23 309 - -
Aip09g03661 465 SMART dnaj_3 19 60 IPR001623 -
Aip09g03661 465 CDD DnaJ 25 57 IPR001623 -
Aip09g03661 465 ProSiteProfiles dnaJ domain profile. 1 68 IPR001623 -
Aip09g03661 465 PRINTS DnaJ domain signature 40 60 IPR001623 -
Aip09g03661 465 PRINTS DnaJ domain signature 60 79 IPR001623 -
Aip09g03661 465 PRINTS DnaJ domain signature 23 38 IPR001623 -
Aip09g03661 465 MobiDBLite consensus disorder prediction 391 409 - -
Aip09g03661 465 Pfam DnaJ domain 25 65 IPR001623 -
Aip09g03661 465 SUPERFAMILY Chaperone J-domain 25 73 IPR036869 -
Aip09g03661 465 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 23 309 - -
Aip09g03661 465 MobiDBLite consensus disorder prediction 373 409 - -
Aip09g03661 465 ProSitePatterns Nt-dnaJ domain signature. 45 64 IPR018253 -
Aip09g03661 465 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 330 417 - -
Aip09g03661 465 Gene3D DnaJ domain 14 85 IPR036869 -
Aip09g03661 465 MobiDBLite consensus disorder prediction 373 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03661 Aip-Chr9 143458186 143463713 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03661 25 65 Miscellaneous Gene Families AT1G16680 53.659 1.76e-06 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03661 09 143458186 143463713 Aip09g03661 09 143458186 143463713 ECH