Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03660 ATGGAGAACCAACTTGACTCACAACCACCACCACAACCCGCGCGCTTAAAGCTATTTGGCTTCAGCGTCCATGAAGACTCCACCATGGAGGAAGAATTACTACTCATGCATGAAGACGTAGCAGATTCAACAACGAAACCATCACCTTCTTCCACCTCCCCCTCTAGGTCGCCGGATTCCGCCGGAGGCGCTGCAGGAGCCAGCGGCGGTTTTGCGTCCTCCTCTTCCGGGGAGCGGAAATACGAGTGTCAGTACTGTTGCAGAGAGTTCGCAAATTCACAAGCACTTGGTGGACACCAAAACGCGCACAAGAAAGAGCGTCAACAGCTCAAGCGAGCACAGTTACAAGCCACGCGAAACGCCGCCGCCGTTTCCTTCGTCAGAAACCCCATCATCTCCGCCTTCGCACCACCGCCGCACCTGCTTGCTCCGCCGGGGTCCATGGTGATGCCGGCGCCGCCTCCCTCGTGGGTGTACATGCCGCCGCGTGCAGCTCCTCCTCCGTTCCACGTGTCAGTATCTCACGGGTGCGTGTTCCCATCGGCGAACAGCAGTAATAATAGTAGCAACTACAGTTACGGTAACGGTAACGGTAACAGTAACAGTAACGGTAATTGTAGCATTAAAAATGGGGGTGTAGGGTTCCCCTATGGTGGCGGTGTAGGGGAACCGTCAAGTGCATTGTCAACGATGATGGGGTCGCAGATGCAAGTGCAGGTACAGGCCCGGGCCCACCATGGCAGGATGGACGGGTCCTCTTTGAGTAGGTTCTCCAAAGGAGATGGTGGGCCCAGTTTTGATGATTCATTGGGCTTGGACTTGCACCTTAGCCTTGCACCAGCTGCGCCGTAA 852 0.5587 MENQLDSQPPPQPARLKLFGFSVHEDSTMEEELLLMHEDVADSTTKPSPSSTSPSRSPDSAGGAAGASGGFASSSSGERKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAAVSFVRNPIISAFAPPPHLLAPPGSMVMPAPPPSWVYMPPRAAPPPFHVSVSHGCVFPSANSSNNSSNYSYGNGNGNSNSNGNCSIKNGGVGFPYGGGVGEPSSALSTMMGSQMQVQVQARAHHGRMDGSSLSRFSKGDGGPSFDDSLGLDLHLSLAPAAP 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03660 283 PANTHER ZINC FINGER PROTEIN 5 10 283 IPR044299 GO:0010090
Aip09g03660 283 PANTHER ZINC FINGER PROTEIN GIS3 10 283 - -
Aip09g03660 283 SUPERFAMILY beta-beta-alpha zinc fingers 77 108 IPR036236 -
Aip09g03660 283 MobiDBLite consensus disorder prediction 1 20 - -
Aip09g03660 283 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Aip09g03660 283 MobiDBLite consensus disorder prediction 43 59 - -
Aip09g03660 283 MobiDBLite consensus disorder prediction 29 76 - -
Aip09g03660 283 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
Aip09g03660 283 MobiDBLite consensus disorder prediction 242 270 - -
Aip09g03660 283 Gene3D Classic Zinc Finger 71 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03660 Aip-Chr9 143445237 143446445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03660 3 281 C2H2 Transcription Factor Family AT1G68360 43.493 2.08e-57 182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03660 09 143445237 143446445 Aip09g03660 09 143445237 143446445 ECH