Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03653 ATGCCGACGAAGGACGACGGAGCCGATAAGGAGAAGTGCTTCGAGCTCTTTAAGGATATAGGATTGGATGAGGGCACCGCCCGCAACACCGTCGCCAACAAAAAAGTCACCACCAACCTCATTACCGTAATCGACGAGGCTGGTGTTACTGGTGGATGCGACCGAACTGTTGGAAATCTTCTTTACACGGTTGCGACAAAGTACCCTGGGAATGCCCTGCCAAATCGCCCAACATTACTTCAATACATTGTCACGTCCAAGGTGAAAACAGCAGCTCAGTTAGATGCAGCACTAGCTTTCCTTGCTGCCATTGGCCCTGACAATCTTGATTTGAAGAAATTTGAAGAAGCCTGTGGTGTTGGCATTGAGGTGTCAACAGAAGATATACAAAATGCTGTTAATGAAGTTTTTGAAGAGAATAAGGAGAAAATTTTGGAGCTACGCTACCGAATAAATGTGGGTGAGTTACTCGGGCATGTTCGGAAGAGACTCCCATGGGCTGATGCAAAAGTTACCAAGGGACTCGTAGATTCAAAACTAGTTGAATTACTTGGACCAAAGACAGCAGCAGATGATGAAAAGCCTACTAAAAAGAAGAAAGAGAAGCCTGCTAAAGTAGAGGAGAAGGCAGCACCTATTGCTGCCCCAGAAAAGCCGCCTGAAGAAGAACTGAATCCATTCTTGATATTCCCTAATCCGGAGGAAAATTTCAAGGTACATACTGATGTTCACTTTAGTGATGGTAGTATTCTGAGATGTTCCAATACAAAGGAACTTCTTGACAAGCACTTGAAAGCAACAGGTGGGAAAGTTTTGACCCGCTTTCCACCAGAACCAAATGGTTATTTGCATATTGGTCATGCCAAGGCAATGTTTATTGATTTTGGGTTGGCAAAAGATAGAAATGGAGGCTGCTATCTGAGGTATGATGATACAAATCCTGAAGCAGAAAAGAAAGAGTACATTGATCACATTGAGGAAATTGTCCGGTGGATGGGTTGGGAACCTTTCAAGATTACATACACGAGTGATTACTTCCAAGAATTATATGAATTAGCAGTTGAGCTCATCAAAAGGGGTCATGCTTATGTCGATCATCAGACACCTGATGAGGTAAAGGAATATAGGGAGAAGAAATTAAACAGTCCTTGGAGGGACAGACCGATTTCAGAATCATTGAAACTCTTTGAGGATATGAGACGTGGACTTATAGAGGAAGGGAAAGCAACACTGAGGATGAAGCAAGACATGCAAAGTGATAACTACAATATGTATGACCTAATTGCGTACCGCATTAAATTTACTCCACACCCTCATGCTGGAGATAAGTGGTGCATCTATCCAAGCTATGATTTTGCTCATTGCACTGTGGATTCTCTTGAGAATGTCACACATTCACTAAATCGGCTAGTGACGGAGAAGTGGGTTGATGGGTGGGATGATCCTCGTCTAATGACACTAGCTGGTTTGCGCCGTAGAGGCATGACCCCGACTTCGATCAATGCTTTTGTTCGTGGTATTGGAATCACTAGAAGTGATGGCACTTTGATATCTGTGGAACGCCTTGAATATCATGTGAGGGAAGAGCTGAATAAAACTGCTGCTCGCACAATGGTTGTCCTAAATCCACTCAAGGTGGTAATTACTAACCTAGAAGCCAACTCAGTGATAGAGGTTGATGGAAAAAAATGGCCTGATGCTCAAGCTGATGATCCATCTGCTTTATACAAGATTCCATTTTCCAATGTTGTATATATTGAGCGTTCAGATTTCCGGATGCAAGATTCAAAAGATTATTATGGGCTTGCGCCTGGTAAATCTGTGATATTGAGATATGCCTTTCCTATAAAGTGCACTGAAGTTATTCTTGCTGATGATAACGAGACTATTCTTGAAATTCGGGCTGAGTATGATCGTTCAAAGAAGACAAAGCCAAAGGGTGTTCTCCACTGGGTTTCTCAGCCTTCTCCAGGTGTTGATCCATTGAAGATGGAAGTCAGGTTGTTTGAGAGGCTATTCCTGTCAGAGAATCCTGCCGAACTTGACAATTGGCTTGGCGATCTAAACCCGAACTCCAAAGTGATAGTTCCCAATGCATATGGCGTGTCCTCACTCAAGGAAGCAAAAGTTGGGGACGCGTTCCAATTTGAAAGATTAGGGTATTTTGTGGTTGACAAGGACTCTACTGTGGAAAAACTTGTTTTTAATCGGACTGTGACCCTAAAAGGAAGCTATGGTAAGGGTGGAAAGTAG 2253 0.431 MPTKDDGADKEKCFELFKDIGLDEGTARNTVANKKVTTNLITVIDEAGVTGGCDRTVGNLLYTVATKYPGNALPNRPTLLQYIVTSKVKTAAQLDAALAFLAAIGPDNLDLKKFEEACGVGIEVSTEDIQNAVNEVFEENKEKILELRYRINVGELLGHVRKRLPWADAKVTKGLVDSKLVELLGPKTAADDEKPTKKKKEKPAKVEEKAAPIAAPEKPPEEELNPFLIFPNPEENFKVHTDVHFSDGSILRCSNTKELLDKHLKATGGKVLTRFPPEPNGYLHIGHAKAMFIDFGLAKDRNGGCYLRYDDTNPEAEKKEYIDHIEEIVRWMGWEPFKITYTSDYFQELYELAVELIKRGHAYVDHQTPDEVKEYREKKLNSPWRDRPISESLKLFEDMRRGLIEEGKATLRMKQDMQSDNYNMYDLIAYRIKFTPHPHAGDKWCIYPSYDFAHCTVDSLENVTHSLNRLVTEKWVDGWDDPRLMTLAGLRRRGMTPTSINAFVRGIGITRSDGTLISVERLEYHVREELNKTAARTMVVLNPLKVVITNLEANSVIEVDGKKWPDAQADDPSALYKIPFSNVVYIERSDFRMQDSKDYYGLAPGKSVILRYAFPIKCTEVILADDNETILEIRAEYDRSKKTKPKGVLHWVSQPSPGVDPLKMEVRLFERLFLSENPAELDNWLGDLNPNSKVIVPNAYGVSSLKEAKVGDAFQFERLGYFVVDKDSTVEKLVFNRTVTLKGSYGKGGK 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03653 750 Gene3D - 123 192 IPR042559 -
Aip09g03653 750 Gene3D Ribosomal Protein L25; Chain P 538 657 IPR020056 -
Aip09g03653 750 PANTHER OS05G0182800 PROTEIN 14 467 - -
Aip09g03653 750 PANTHER OS05G0182800 PROTEIN 467 749 - -
Aip09g03653 750 Pfam Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 12 169 IPR007639 GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418
Aip09g03653 750 PANTHER GLUTAMINE-TRNA LIGASE 14 467 - -
Aip09g03653 750 PANTHER GLUTAMINE-TRNA LIGASE 467 749 - -
Aip09g03653 750 MobiDBLite consensus disorder prediction 187 216 - -
Aip09g03653 750 SUPERFAMILY Ribosomal protein L25-like 534 743 IPR011035 GO:0006412
Aip09g03653 750 Pfam Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 173 244 IPR007638 GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425
Aip09g03653 750 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 277 288 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Aip09g03653 750 Gene3D Ribosomal Protein L25; Chain P 659 743 IPR020056 -
Aip09g03653 750 Gene3D - 8 122 IPR042558 -
Aip09g03653 750 Pfam tRNA synthetases class I (E and Q), catalytic domain 468 531 IPR020058 GO:0004812|GO:0005524|GO:0043039
Aip09g03653 750 Pfam tRNA synthetases class I (E and Q), catalytic domain 270 467 IPR020058 GO:0004812|GO:0005524|GO:0043039
Aip09g03653 750 SUPERFAMILY Nucleotidylyl transferase 270 540 - -
Aip09g03653 750 MobiDBLite consensus disorder prediction 187 222 - -
Aip09g03653 750 Gene3D HUPs 242 537 IPR014729 -
Aip09g03653 750 PRINTS Glutamyl-tRNA synthetase signature 274 286 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Aip09g03653 750 PRINTS Glutamyl-tRNA synthetase signature 303 316 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Aip09g03653 750 PRINTS Glutamyl-tRNA synthetase signature 448 458 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Aip09g03653 750 Pfam tRNA synthetases class I (E and Q), anti-codon binding domain 534 725 IPR020059 GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03653 09 143379405 143385496 Aip09g03653 09 143379405 143385496 ECH