Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03647 ATGAGACTCTCCCTCTTCTCACTCTTACCCCACCGCCATCCCAATATCATCACAACCACGCCCCGCTCCTCCCGCATGGACGCATCCTTCCACCGCCGCAAGGACAAGGTCGTCGTCATCGTCGGTGCCACCGGCTCAGGCAAATCCCGTCTCTCTCTCGACCTCGCCTCCCTCTCCTTCCCCTTCTCCGAACTCATCAACTCTGACAAAATGCAAGTCTACAACGGCCTCGAAATCACAACCAACAAGATCCCCATTCACGAGCGCAAAGGCGTCCCTCACCACCTCCTCGGCGACGTATCCCCTGCACACGGCGAGTTCTCCCCCTCCGACTTCCGCCGACGCGCCGGAGAAATCATCTCCGATATCACCTCCCGAAATAAGCTCCCCATAGTCGTTGGCGGCTCCAACTCCTTCGTCCACGCACTTCTGGTGGAACGATTCGACCCGGAGTTGAACGTGTTTGATGGGGACGCTGAGATATCGCCGGAGTTGAGGTACGAGTGCTGCTTCCTCTGGGTGGATATATCGTTCAATGTGTTGAGGGATTACTTGTTGAAGCGAGTGGACGACATGCTTGACTCAGGAATGGTGGAAGAGTTAGCTGAGTTCTTCGACCGCGACTCGCCCGATTTAGAACTCGAATCGGCCAGCCGAACCGGTTTGAGAAAAGCCATTGGGGTGCCTGAGTTCGACCGCTTTTTTAAATTGTACCCTCCTGGTTGCCACGATTCACTGCGGGCGGGTGCATACGAGAAAGCCGTGAGGGCCATAAAGGATAACACGTGTCAGCTGGCCAAGAGGCAGATACAAAAGATCCACCGGTTAAAAGCTGCCGGGTGGGACCTACGGAGGCTAGATGCCACGGAGGCGTTTCGGGTGCTCATGACGTCAGGGCGTGACGGCGGCGCCAACGGCGGAGATAGGTGGTCCGATGTGTGGGGGAGGGATGTGTTGGAACCAAGCGTGAAGATTGTGAGGCGCTTCTTGATGGAGTAG 999 0.5666 MRLSLFSLLPHRHPNIITTTPRSSRMDASFHRRKDKVVVIVGATGSGKSRLSLDLASLSFPFSELINSDKMQVYNGLEITTNKIPIHERKGVPHHLLGDVSPAHGEFSPSDFRRRAGEIISDITSRNKLPIVVGGSNSFVHALLVERFDPELNVFDGDAEISPELRYECCFLWVDISFNVLRDYLLKRVDDMLDSGMVEELAEFFDRDSPDLELESASRTGLRKAIGVPEFDRFFKLYPPGCHDSLRAGAYEKAVRAIKDNTCQLAKRQIQKIHRLKAAGWDLRRLDATEAFRVLMTSGRDGGANGGDRWSDVWGRDVLEPSVKIVRRFLME 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03647 332 Pfam IPP transferase 72 146 - -
Aip09g03647 332 Pfam IPP transferase 163 271 - -
Aip09g03647 332 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 27 331 - -
Aip09g03647 332 Gene3D - 34 330 IPR027417 -
Aip09g03647 332 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 178 283 - -
Aip09g03647 332 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 206 IPR027417 -
Aip09g03647 332 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 27 331 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03647 Aip-Chr9 143325418 143326416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03647 166 330 C2H2 Transcription Factor Family AT2G27760 27.461 1.84e-09 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03647 09 143325418 143326416 Aip09g03647 09 143325418 143326416 ECH