Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03646 ATGGAAAAAGCGTGCGAGTTTAATTACAAAATTGCCCCAACTATTTCCGGTGACATTAATAGTCAATTGCTGACCTCTCACCGCGGTCAACTGTCCTCGGCCATGGAGCTCCCCTCTCTGAAACTGCAATCGCAAAGGCTCTTCTTGTCTCCACGGAGGAGTCAAAGTCAAAGAAAGAAAGTGGTGGTGGTCACGGCCAAGAGAAGGTCAAACATCGAAGGTGTGAGCGACGAGTTGAATGCCATCGCTTCTCAGAACTTGGACTTGGCACCCTCTCGCAGAATGGTCCGTGCTGCTTTCCTACCGGTGCACCAGCACCTCGACCATTACTTGTTCAAGGCTGCTCCTGCTGGGATCAGAACTCAAGAGTGGTATGAAACGAATTCCAGGGGATTCGAAATTTTTTGCTATTTTGTTAGTTTGAAGGTCGTTCTCTGTTTCTGCCATGGATATGGCAGCACTTGCACCTTCTTTTTTGAAGGTCTTGCCAAGAGAATTGCTGCTTCTGGATATGCTGTTTATGCTATGGATTACCCAGGTTTTGGCCTTTCTGAAGGCTTACATGGTTACATTCCAAAATTTGATGATCTGGTTGATGATGTTATAGAACAATACGCAAAAATTAAAGCAAAGCCTGAGCTTAGAGAGTTGCCTGGATTTCTATTGGGGCAGTCAATGGGTGGAGCCATTGCCCTTAAAGTTCATTTGAAGGAACCAAATAATTGGGATGGGGTAATCCTTGTAGCACCAATGTGTAAAATTGCAGAAGAAATGTTACCATCTAAGGCAGTTTTGAAGGCATTGGATCTTTTGTCTTATGTGATGCCAAAGGCAAAACTGTTCCCATACAAAGATTTATCCGCATTGACATTCAGAGAACCAGGCAAGAGAAAAGTGGCCAACTACAATGTTCTATCTTATGATGATCCAACAAGACTCAAAACTGGCATGGAACTCTTAAGTGCCACACAGGATATTGAGTCACAACTGCATAAGGTTTCGGCTCCATTGTTGATTCTTCATGGATCAGAAGACAAGGTGACAGATCCATTGGTCAGCCAATTTCTTTATGAGAAAGCTTCTAGTAAGGATAAGATTATGAAGATTTATGAAGGAGCGAACGAGATCGGCAGAAGAAGGTTTGGTGGACGTGGTGACTCCCATCTGCGACTTGGGACTCACTTGATTGCTGCATCTTCACCTTCATCTTCATCATCGTCATCATCAACAATGTCACTTCTTAATCAGCTCTTTAACAGAGGTGTTTTCGCCACTCGCTGTAAAACATGTCTTAACCTGTCGATCTCGCGCATTAAGCTGCTGCAAAACAAGAGAGATGCGCAACTGAAGCAAATGCGCAAGGAGATTTCCCAATTCTTGCAGGCTGGCCAAGAGGCAATTGCTAGAATTCGGGTGGAGCATATCATTCGAGAACAAAATATATGGGAGGCATATGAAATTTTAGAGTTATTCTGTGAATTTGTTCTTGCTCGTGTACCTATAATTGAGAGCCAGAAGGAGTGCCCGCCAGAATTGCGAGAAGCCATTGCTAGTTTAATTTTTGCTGCCCCTAGATGTTCAGATGTGCCAGACTTATTGCACATCAAGAACTTATTCACCTCTAAATATGGAAAGGAGTTTGTATCTGCAGTATCCGAACTTCGTCCTGATTCTGGCGTGAACCGCATGATAATTGAGAAGCTCTCTGTTAGTGCTCCACCTGGAGAAGTAAAGCTCAAGGTCTTGAGGGATATTGCTAAAGAATATAACATAACATGGGATTCTTCTAAAACTGAGGCAGAATTTAGGAAAAATCATGAAGATCTCCTGGGTGGAGCAAAACATGTTGATATTGGATCTGCCGTTTCTCATACTCCTAGGAAAAAAGGAACTAGTAATTCATCATCTTCTAGTACAGAATATTCCATCAAGTCCATGCGTAACAAGCAAGAACAAAAACACCTTGAAACTCCTAGGCCTTCAACCAATGATTATTGGATGAATACGAATGAAATTGAACAGTCCCTCAACTATGCTAAGGTTCCCACTACTGATGCCAAAAGAGAGACAAGGCCGCAGTCCTCTGATGTATTGGAGAAGGCTCAAGCGGCCATTGCTTATGCAGAGCGTGCATCCGCTGCTGCTCGTGCTGCAGCTGCACTAGTTAACAATGATTTTGGCTCACTAAAGCTGGATGGTAAATCTTCATAG 2211 0.4333 MEKACEFNYKIAPTISGDINSQLLTSHRGQLSSAMELPSLKLQSQRLFLSPRRSQSQRKKVVVVTAKRRSNIEGVSDELNAIASQNLDLAPSRRMVRAAFLPVHQHLDHYLFKAAPAGIRTQEWYETNSRGFEIFCYFVSLKVVLCFCHGYGSTCTFFFEGLAKRIAASGYAVYAMDYPGFGLSEGLHGYIPKFDDLVDDVIEQYAKIKAKPELRELPGFLLGQSMGGAIALKVHLKEPNNWDGVILVAPMCKIAEEMLPSKAVLKALDLLSYVMPKAKLFPYKDLSALTFREPGKRKVANYNVLSYDDPTRLKTGMELLSATQDIESQLHKVSAPLLILHGSEDKVTDPLVSQFLYEKASSKDKIMKIYEGANEIGRRRFGGRGDSHLRLGTHLIAASSPSSSSSSSSTMSLLNQLFNRGVFATRCKTCLNLSISRIKLLQNKRDAQLKQMRKEISQFLQAGQEAIARIRVEHIIREQNIWEAYEILELFCEFVLARVPIIESQKECPPELREAIASLIFAAPRCSDVPDLLHIKNLFTSKYGKEFVSAVSELRPDSGVNRMIIEKLSVSAPPGEVKLKVLRDIAKEYNITWDSSKTEAEFRKNHEDLLGGAKHVDIGSAVSHTPRKKGTSNSSSSSTEYSIKSMRNKQEQKHLETPRPSTNDYWMNTNEIEQSLNYAKVPTTDAKRETRPQSSDVLEKAQAAIAYAERASAAARAAAALVNNDFGSLKLDGKSS 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03646 736 PRINTS Alpha/beta hydrolase fold signature 170 185 IPR000073 -
Aip09g03646 736 PRINTS Alpha/beta hydrolase fold signature 337 351 IPR000073 -
Aip09g03646 736 PRINTS Alpha/beta hydrolase fold signature 221 234 IPR000073 -
Aip09g03646 736 SUPERFAMILY alpha/beta-Hydrolases 101 374 IPR029058 -
Aip09g03646 736 Gene3D alpha/beta hydrolase 117 375 IPR029058 -
Aip09g03646 736 MobiDBLite consensus disorder prediction 617 664 - -
Aip09g03646 736 Pfam Regulator of Vps4 activity in the MVB pathway 428 591 IPR005061 GO:0015031
Aip09g03646 736 Pfam Serine aminopeptidase, S33 142 373 IPR022742 -
Aip09g03646 736 PANTHER PHOSPHOLIPASE-RELATED 60 373 - -
Aip09g03646 736 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 60 373 - -
Aip09g03646 736 MobiDBLite consensus disorder prediction 625 645 - -
Aip09g03646 736 Gene3D - 415 602 IPR042277 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03646 Aip-Chr9 143292715 143298703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03646 58 373 Acyl Lipid Metabolism Gene Families AT1G77420 61.801 1.49e-143 424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03646 09 143292715 143298703 Aip09g03646 09 143292715 143298703 ECH