Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03644 ATGATGAAGACAATTTCCTCTACAGAAAGAAAGAAAGAAAGAAAGAAAAGAGGAGTGCTGGCTGGCTTGCCCCTCATATTTATATATATTTTCTGTCTCTCTCTACTCTCTCTGCGTGTCGGTACCATGAGACCAGAAGGAAACCCATTAGACCTTAACAATTTGCCCGATGACTACAATAGAGATCATGGCAAACAACTCCTCCAAGACACCTTCTCTCCCGGTTGCAGGAAAAAGAAAAGCGGCGGCGGTAAGGATGGAAAAGAGGAGTGTGGGAAGGTGTATGAGTGTAGATTTTGTTCCCTCAAGTTCTGCAAGTCCCAGGCTCTTGGGGGACACATGAACCGCCACCGCCAAGGCTACTCTCTACTCTATCTCTCTTTTTCTTTTCTTTTTTTTATATTATTATATACAT 415 0.4313 MMKTISSTERKKERKKRGVLAGLPLIFIYIFCLSLLSLRVGTMRPEGNPLDLNNLPDDYNRDHGKQLLQDTFSPGCRKKKSGGGKDGKEECGKVYECRFCSLKFCKSQALGGHMNRHRQGYSLLYLSFSFLFFILLYT 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03644 138 ProSitePatterns Zinc finger C2H2 type domain signature. 97 117 IPR013087 -
Aip09g03644 138 PANTHER ZINC FINGER PROTEIN JAGGED 43 119 IPR045320 GO:0003700
Aip09g03644 138 PANTHER ZINC FINGER PROTEIN JAGGED 43 119 IPR031113 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03644 Aip-Chr9 143257279 143260086 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03644 46 119 C2H2 Transcription Factor Family AT1G13400 56.757 2.80e-17 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip09g03644 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03644 09 143257279 143260086 Aip09g03644 09 143257279 143260086 ECH