Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03637 ATGATGAAAATAAGTTGCAACGGGTGCCGCATACTCCGCAAAGGTTGCAATGATGATTGCGTAATAAGGCCATGCCTGCAGTGGATAAACTCTCCGGAGTCCCAAGCCAATGCCACACTCTTCCTTGCCAAATTCTACGGTCGCACTGGCTTGCTCAACCTCATCACTGCTGCTCCCAAAAACCTTGCCCCGGCTGTGTTTAGGTCTCTCTTGTATGAAGCTTGTGGGAGAATAGTGAATCCCGCATATGGCTCCATGGGCCTCTTCTGGACGGGACAATGGGCCCGATGCGAGGCTGCTGTCCGTGCTGTCTTGATGGGGTCCAAGCCCAATGATGAGGTGGCACCTTTTCATTCCCCAAGCTGGGGGTCTTGTGACATACGCCACGTGCCAAGACTCAACACCGGTCTGGTCGACGTCAGAGACAGAACCGGGAAAATCTTCAAGCCCCAACCGCGAGTGGCTTTGCTGGAGTCGGATGTGCTGAGCCAGATTCAGCCCAACCGAGCCACCAAGGAAACCGAGATCAACTTGGAACTCTCTCTTGGCTTCCATTGA 558 0.5376 MMKISCNGCRILRKGCNDDCVIRPCLQWINSPESQANATLFLAKFYGRTGLLNLITAAPKNLAPAVFRSLLYEACGRIVNPAYGSMGLFWTGQWARCEAAVRAVLMGSKPNDEVAPFHSPSWGSCDIRHVPRLNTGLVDVRDRTGKIFKPQPRVALLESDVLSQIQPNRATKETEINLELSLGFH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03637 185 Pfam Lateral organ boundaries (LOB) domain 5 103 IPR004883 -
Aip09g03637 185 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 2 134 - -
Aip09g03637 185 ProSiteProfiles LOB domain profile. 4 110 IPR004883 -
Aip09g03637 185 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 2 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03637 Aip-Chr9 143179521 143180879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03637 2 132 AS2 family AT1G68510 64.964 5.30e-59 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip09g03637 LOB 2.3e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03637 09 143179521 143180879 Aip09g03637 09 143179521 143180879 ECH
Aip09g03637 09 143179521 143180879 Aip05g03128 05 134809301 134813934 ECH
Aip09g03637 09 143179521 143180879 Aip04g03836 04 132592230 132593395 ECH