Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03621 ATGTATGAGGATTCCAGAGGCAACAGGATGGTTGTGGTACGATGGTTTCACAAAATTGATGAGGTTGGTATCGATTTGCCTCATGATTTTTGTGAGAGAGAGGTTTTCTTTTCTCTTTATCTTCAAGATCTAAGTATTGAATGCATAGATGGATTGGCTTCTGTCGTTACTCCACAACATTACGAAAAGCTTCAGAGTGTTGCGAGATATACTCTCTGGGAGCCATTCATATGCAGAAAACAATTTGATAATGATGATGTTAAACCCTTCGATGTATCCCAGCTTAAGGGTTACTGGAAACAAGATATAATCAGATTCATGTGTGCGCCTTCTGAATCAAGGTCTCATGGGAGTTCTGGTCTGTCTGACAATAGTCAAGGAAACTCTGATCCAGCTGCTGAGAGTAGACCTAAGAAGAGGCGGCGCCTGACAAAAGTTGGTAGCAAAGAAGTGGCTGATTTGGCTGCTATTAAACTAGATTTGAGTAATTCTAAATCCAATACCAAAATTGGAACGGGAAAGACTTCGTTGAAGAATGTTTCTGATGACTATTTAGTTGTAGGTTCCCAAGTTGAGGTTCTCTCACAGGACAGTGGAATGAGAGGCTGTTGGTTCAGAGCCTCTATTGTTAAGATGCACAAAAATAAAGTGAAGGTTCAATATCAAGACATTCAGGATGCCGTTGATGAAACCAAGAAGCTCGAGGAATGGGTTTTGGCTTCCAAAATCTCAGCTCATGATGATCTGAGGCTACGGAAGTATGGAAGGAATAAGATTCGGCCAGTCCCACCACCTCATAGATTTGAAAAATCCACGGGGGTTGATGTTGGTTCCATTGTTGATGTTTGGTGGCATGACGGTTGGTGGGAAGGCATTGTTGTTAAAATAGTGTCTGAAGCTAAATATCGTGTTTATTTCCCAGGGGAGAAGTTGGTGTCAATGTTTGACCTTGATAACCTACGACAGTCTCAAGAATGGATAGGGAATGAGTGGGTGAAGATGAGGGGAAGGCCTGACCTTGTGGATTCTGTATTGTCAACCTTAAAGGCAAAACAAGGTCCCTGCAAATCAAGTGAATTATCCACAGAAGATGTCATACAATCAAAGGAGGCTGATGCATGCTTGGATTCTGAAGGGGATAAAAGTAAGAAGCCTGTGTTGTTTCCAGACCTCTTGAAAGATGATATACTATCTCAATTACGGTGGTCATCTAGGAAGAGGAGACGTAGTAATGGCACCTCTTTGGGAAGCGATAAAGATAGGAGAAAGTCCCCAAACTCTCTGGAATCTGATGCTTCTGACAGTTTTGTGATTCCAGCATTTGTGAATGCTGAACATGACGACTTCACATATGGAGGGGATCCTTCTGTTTTCAACTCTTCGGTTGTCCCTTCCTTAACCAACTTAGTTATGTGTAGGTAA 1422 0.4198 MYEDSRGNRMVVVRWFHKIDEVGIDLPHDFCEREVFFSLYLQDLSIECIDGLASVVTPQHYEKLQSVARYTLWEPFICRKQFDNDDVKPFDVSQLKGYWKQDIIRFMCAPSESRSHGSSGLSDNSQGNSDPAAESRPKKRRRLTKVGSKEVADLAAIKLDLSNSKSNTKIGTGKTSLKNVSDDYLVVGSQVEVLSQDSGMRGCWFRASIVKMHKNKVKVQYQDIQDAVDETKKLEEWVLASKISAHDDLRLRKYGRNKIRPVPPPHRFEKSTGVDVGSIVDVWWHDGWWEGIVVKIVSEAKYRVYFPGEKLVSMFDLDNLRQSQEWIGNEWVKMRGRPDLVDSVLSTLKAKQGPCKSSELSTEDVIQSKEADACLDSEGDKSKKPVLFPDLLKDDILSQLRWSSRKRRRSNGTSLGSDKDRRKSPNSLESDASDSFVIPAFVNAEHDDFTYGGDPSVFNSSVVPSLTNLVMCR 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03621 473 Pfam Agenet domain 188 264 IPR008395 -
Aip09g03621 473 ProSiteProfiles BAH domain profile. 1 93 IPR001025 GO:0003682
Aip09g03621 473 MobiDBLite consensus disorder prediction 114 147 - -
Aip09g03621 473 MobiDBLite consensus disorder prediction 404 431 - -
Aip09g03621 473 Gene3D - 1 178 IPR043151 -
Aip09g03621 473 Gene3D - 179 251 - -
Aip09g03621 473 PANTHER AGENET AND BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 472 - -
Aip09g03621 473 MobiDBLite consensus disorder prediction 411 428 - -
Aip09g03621 473 MobiDBLite consensus disorder prediction 114 132 - -
Aip09g03621 473 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 1 472 - -
Aip09g03621 473 SMART agenet_At_2 183 251 IPR014002 -
Aip09g03621 473 SMART agenet_At_2 272 328 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03621 Aip-Chr9 142918520 142922004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03621 195 326 PHD Transcription Factor Family AT5G58610 30.657 2.32e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03621 09 142918520 142922004 Aip09g03621 09 142918520 142922004 ECH