Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03607 ATGGCAATGGCCAAGCTTGCCATATACAGCAATAATAATACCATTTTCTTACGTGAAATCATGCCTCTGCTGCTGCCCTATACATACTCTTCACACCATGCACTCTCATTTCAGGTTCCAATGGCTCCTCTGTTTTCCGTCATCGTCCTCTTCATCATCATCATCTGTGATTCCCCGTTGGCACACTCTCGCACCACACCCCATCACATACCTAAAACCACGTTCCTCGATGTCACTGCCTCCATTCAAAAAACCCTTCAAGTTCTCGACTTCAACCACCACAAACAACAAGAGCAACTCAGTTCTACGCCATCATCAAAGCTCTCTCTGCATCTTCATTCTCGAGTATCACTTCAGAAGCCAACACACCACGACTACAAGTCCCTCACTTTATCCCGACTCGAGCGCGACTCAGCCCGAGTCACGACCCTCCTAACTCGTTCACAATCCTTCAGCGTCTCGGAACTTGAGGGACCCATCGTCTCCGGAACTAGTCAGGGAAGCGGCGAGTACTTCTCCCGAGTCGGAATCGGCGAGCCACCGAATCCTGTCTACATGGTCCTCGACACTGGCAGTGACATCAGCTGGGTGCAATGCTCACCCTGCTCCGGTTGCTACCGCCAATCCGACCCGATATTCGACCCGAACTCATCGTCTTCCTTTCACCCACTCTCCTGCGACTCAACTCACTGTCAATTGCTCGACGAATCTCAGTGTCTCAACAGCAACTGCCTCTACGAGGTCTCCTATGGCGATGGTTCCTATACCGTCGGTGAATTCGTCACCGAAACCATCACCATTGGCCAAAGCTCCGTCACAAACATCGCCATCGGCTGCGGCCACAACAACCAAGGCTTGTTCATCGGAGCAGCAGGGTTGCTCGGACTCGGCGGCGGAACCTTATCTTTTCCGGCTCAGCTGAATTCGACGTCGTTTTCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGACGGCGGTGACGCGGTTACGGAGGGAGGTGTATGAGTGGCTGAGAAGGGCGTTTTTAAGTGGGACTCAGGGGTTGGCGATGGCGAGAGGGATGTCGTTGTTTGACACGTGCTACGACATGTCGTCGATGGGCAGTGTGGAGGTTCCGACGGTGTCGTTTCATTTTGAAGGTGGGATGGTCTTGACCTTGGATGCTAACACTTACCTGATACCGGTTGACTCCGTTGGCACCTTCTGCTTTGCGTTCGCTCCCACGAACTCGCCCCTGTCCATCATTGGGAATGTTCAGCAGCAGGGGACACGTGTCAGTTTCGATCTCGCTAATTCCCTCGTTGGCTTCTCTGCTAACAGTTGCTGA 1626 0.4219 MAMAKLAIYSNNNTIFLREIMPLLLPYTYSSHHALSFQVPMAPLFSVIVLFIIIICDSPLAHSRTTPHHIPKTTFLDVTASIQKTLQVLDFNHHKQQEQLSSTPSSKLSLHLHSRVSLQKPTHHDYKSLTLSRLERDSARVTTLLTRSQSFSVSELEGPIVSGTSQGSGEYFSRVGIGEPPNPVYMVLDTGSDISWVQCSPCSGCYRQSDPIFDPNSSSSFHPLSCDSTHCQLLDESQCLNSNCLYEVSYGDGSYTVGEFVTETITIGQSSVTNIAIGCGHNNQGLFIGAAGLLGLGGGTLSFPAQLNSTSFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAVTRLRREVYEWLRRAFLSGTQGLAMARGMSLFDTCYDMSSMGSVEVPTVSFHFEGGMVLTLDANTYLIPVDSVGTFCFAFAPTNSPLSIIGNVQQQGTRVSFDLANSLVGFSANSC 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03607 541 Pfam Xylanase inhibitor N-terminal 171 311 IPR032861 -
Aip09g03607 541 Gene3D Acid Proteases 146 316 IPR021109 -
Aip09g03607 541 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 423 541 - -
Aip09g03607 541 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 60 313 - -
Aip09g03607 541 PANTHER ASPARTYL PROTEASES 60 313 IPR001461 GO:0004190|GO:0006508
Aip09g03607 541 ProSiteProfiles Peptidase family A1 domain profile. 171 537 IPR033121 -
Aip09g03607 541 SUPERFAMILY Acid proteases 164 313 IPR021109 -
Aip09g03607 541 Gene3D Acid Proteases 420 541 IPR021109 -
Aip09g03607 541 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 186 197 IPR001969 GO:0004190|GO:0006508
Aip09g03607 541 Pfam Xylanase inhibitor C-terminal 423 537 IPR032799 -
Aip09g03607 541 PANTHER ASPARTYL PROTEASES 423 541 IPR001461 GO:0004190|GO:0006508
Aip09g03607 541 SUPERFAMILY Acid proteases 423 541 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03607 Aip-Chr9 142774573 142776198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03607 161 309 Miscellaneous Gene Families AT1G77480 33.742 5.53e-18 84.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03607 09 142774573 142776198 Aip09g03607 09 142774573 142776198 ECH