Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03605 ATGTCAGCCTGTCAGCCAGCTGATACACCAATGGAAGAAGGATTGAAGTTATCAGTTGAATCAAATCAAGTGCCAGTCGATAAAGGGCGATACCAGAGATTGGTTGGAAGGTTAATGTACTTGGCACACACAAGGTCAGATCTTGCATATGCATTGAGTGTTaggctgaatTTAGAGGAATGGCACTTGGACTATGCGAAACACTATGGCCTCTTGATGGATTTGGATTTTCCCCCCAAGCAACCAATTCAATTGTATTGTGACAACAAGGCTGCATGTGATATTGCTCATAATCCAGTCCAACACGATCGTACGAAGCATGTGGAAGTAGGTAGATTTTTCATTAAGGAGAAACTAGATACGAAGATTCCGGAGTTACCTAAAATTCGATCAGAAGATCAACTGGCAGATATCCTCACAAAAGCAGTTTCAAGCTTCTTCCTTCACTCGCATTACACACTTTCTGTGCAAGAAGAAAAAAGAGTGTTTCTTGAAAGAGCAGAGCAGAGCAGAAAGAGAGAAATGGAGAGTGCGATACGTGGGAGATTCGCTCTTTCTCCCAACGGTATCTCCAACCCTAAACCAGGAGACAGATATTCACTTTGTAGAGGACCATGCTCCAATCTTTGCATCCCCACAGCTGCAATAACTACAAGACCGGGCAAAGGTGCAGGGCTGCTGGAAAAGCAAGTAATTGAAAAAGTCACTCCTGGCCGTGAATCTGAATTTGATTTGAGGAAATCGCGAAAATCAGCGCCACCATATCGCGTAATATTGCACAATGACAACTTCAATAAACGGGAATATGTGGTCCAAGTACTGATGAAGGTTATTCCTGGGATGACCATTGTCAATGCTGTTAATATCATGCAAGAAGCGCACTGCAACGGGTTGTCAGTGGTTATCATCTGTTCCCAAGCTGATGCTGAAGAATACTGCATGCAACTGAGAGGAAATGGGCTACTGAGTTCAATTGAGCCTGCAGGCGGAGGGTGCTGA 999 0.4364 MSACQPADTPMEEGLKLSVESNQVPVDKGRYQRLVGRLMYLAHTRSDLAYALSVRLNLEEWHLDYAKHYGLLMDLDFPPKQPIQLYCDNKAACDIAHNPVQHDRTKHVEVGRFFIKEKLDTKIPELPKIRSEDQLADILTKAVSSFFLHSHYTLSVQEEKRVFLERAEQSRKREMESAIRGRFALSPNGISNPKPGDRYSLCRGPCSNLCIPTAAITTRPGKGAGLLEKQVIEKVTPGRESEFDLRKSRKSAPPYRVILHNDNFNKREYVVQVLMKVIPGMTIVNAVNIMQEAHCNGLSVVIICSQADAEEYCMQLRGNGLLSSIEPAGGGC 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03605 332 Gene3D - 249 327 IPR014719 -
Aip09g03605 332 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 175 332 IPR022935 GO:0006508
Aip09g03605 332 SUPERFAMILY ClpS-like 249 326 IPR014719 -
Aip09g03605 332 CDD RNase_HI_RT_Ty1 71 145 - -
Aip09g03605 332 PANTHER BNAA07G24510D PROTEIN 175 332 - -
Aip09g03605 332 Pfam ATP-dependent Clp protease adaptor protein ClpS 251 318 IPR003769 GO:0030163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03605 Aip-Chr9 142757610 142761495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03605 3 53 Receptor kinase-like Gene Family AT4G23160 41.176 9.37e-07 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03605 09 142757610 142761495 Aip09g03605 09 142757610 142761495 ECH