Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00595 ATGCAAGATCCAACAACAGTATTCCAAATCCAACAAGCCTTGCTGAAACAACCACACTTCCCAGAACAAGAACAACAACTAAAGTGTCCAAGGTGTGAATCCACAAACACCAAGTTCTGTTACTACAACAACTACAACCTCTCTCAGCCACGCCATTACTGCAAGAATTGCAGAAGGTATTGGACCAAAGGTGGCGCCTTGAGGAACATACCCGTTGGTGGTGGAACCAGAAAGACCCACAAACGTTCTTCTTCATCTTCATCTTCCACTTCAAATTCATCCATCAAACGGCCTTCATCATCATCATCATCACAACAAGCCAATTCTATTACTACTCATAGTAATAATAGCGTTATTTGTTCCGGGTCTGATTCGACCCGGACTTGCACCGACCCGGTTGGTCAAGATCAGAGGGTGTTGAACATTGGTGGTAGCTTTAGTTCACTATTGGGAAGAGATGGACCTTTTGGGGGGATTTTAGAGGGTATAAATTCAAATGGGTCAGAGCTGAAAATTGGTGAATTTGGTGGTGGGATTGGGAATGTGGGTTCTGGATTGGTCGCGAATCCGGATTCAGGTCGAAACCCGGGTTTGGATATTCAGAATAATGGTGATTCAAGCTATTGGAATAATGGTGGAGGTGGTGGTCATGGTTGGTCTGATCTTGCAATATACACACCTGGGTCAAGCTTTCAGTAG 699 0.4449 MQDPTTVFQIQQALLKQPHFPEQEQQLKCPRCESTNTKFCYYNNYNLSQPRHYCKNCRRYWTKGGALRNIPVGGGTRKTHKRSSSSSSSTSNSSIKRPSSSSSSQQANSITTHSNNSVICSGSDSTRTCTDPVGQDQRVLNIGGSFSSLLGRDGPFGGILEGINSNGSELKIGEFGGGIGNVGSGLVANPDSGRNPGLDIQNNGDSSYWNNGGGGGHGWSDLAIYTPGSSFQ 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00595 232 MobiDBLite consensus disorder prediction 195 210 - -
Aip09g00595 232 ProSiteProfiles Zinc finger Dof-type profile. 27 81 IPR003851 GO:0003677|GO:0006355
Aip09g00595 232 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 232 IPR045174 GO:0003700|GO:0006355
Aip09g00595 232 MobiDBLite consensus disorder prediction 78 134 - -
Aip09g00595 232 MobiDBLite consensus disorder prediction 68 134 - -
Aip09g00595 232 ProSitePatterns Zinc finger Dof-type signature. 29 65 IPR003851 GO:0003677|GO:0006355
Aip09g00595 232 PANTHER DOF ZINC FINGER PROTEIN DOF3.1-LIKE 15 232 - -
Aip09g00595 232 MobiDBLite consensus disorder prediction 190 212 - -
Aip09g00595 232 Pfam Dof domain, zinc finger 25 81 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00595 Aip-Chr9 6590403 6592401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00595 1 160 C2C2-Dof Transcription Factor Family AT1G51700 50.595 5.40e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aip09g00595 zf-Dof 1.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00595 - - aip:107619380 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00595 09 6590403 6592401 Aip09g00595 09 6590403 6592401 ECH
Aip08g00223 08 1581117 1581824 Aip09g00595 09 6590403 6592401 PCT