Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02375 ATGATGGCAGGTAGTGGACAACTAACAGTTCCACCAGGGTTTCGGTTCCATCCAACTGATGAGGAGCTTCTCTACTATTACCTAAAGAAGAAAGTTTCTTATGAAGCCATTGACCTTGATGTCATTAGAGAAGTTGATCTCAACAAACTTGAACCTTGGGACCTCAAAGATAAATGCAGAATAGGATCAGGGCCTCAAAACGAGTGGTATTTCTTCAGTCACAAAGACAAGAAGTACCCAACAGGAACAAGGACCAATAGGGCAACCACTGCTGGTTTTTGGAAAGCCACTGGGAGGGACAAGGCCATATACCATACTAACAATTCCAAGAGGATTGGAATGAGGAAAACCCTAGTTTTCTACATCGGCCGTGCGCCCCACGGCCAGAAGACTGACTGGATCATGCATGAGTACCGCCTCGATGAAGACGACGCCGAAGTTCAGGAGGATGGGTGGGTGGTGTGCAGGGTTTTCAAGAAGAAAAACCAAAGCAGAGGGTTTCAACAAGAAATTGAAGAAGAGGAACATCATCACTTAGCAGCAGAACATCAACACATGAGAGGAGTAGCAAGCCAACAAGTTCTGGACCCAAAACACCACCACCACTTGCAACATCATCAAGGACTCTATGATAATGATAATGATAATAATTACACCAATAATTTTGATGGATCCATGCACCTTCCACAGTTGTTCAGTCCAGAATCTTCCGTGGCTACCGCGGCGGCGCACACTTCCATGAATGCCATGGACATTCTTGAATGCTCCCAGAACCTTCTAAGGCTCACAACAACAAGTGGATGTGGACTCAATCTCATGCAACAACAACATGGAGAGAGGTTCAATGGTGATTGGTCTTTCTTGGATAAGCTTCTTGCTTCACACCATGGCAGCACCATGGATCATCATCACCATCATCATCATCATAGCAAATGCAACAATAATCTTCATCATCAGCATCCTGCAATTGCTATTGGAACTACTTCATCTCAGAAATTCCCATTTCACCACCTTGGTTGTGACAACCATGATATCATGAAGTTTTCCAAGTAG 1053 0.4444 MMAGSGQLTVPPGFRFHPTDEELLYYYLKKKVSYEAIDLDVIREVDLNKLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTNNSKRIGMRKTLVFYIGRAPHGQKTDWIMHEYRLDEDDAEVQEDGWVVCRVFKKKNQSRGFQQEIEEEEHHHLAAEHQHMRGVASQQVLDPKHHHHLQHHQGLYDNDNDNNYTNNFDGSMHLPQLFSPESSVATAAAHTSMNAMDILECSQNLLRLTTTSGCGLNLMQQQHGERFNGDWSFLDKLLASHHGSTMDHHHHHHHHSKCNNNLHHQHPAIAIGTTSSQKFPFHHLGCDNHDIMKFSK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02375 350 SUPERFAMILY NAC domain 3 160 IPR036093 GO:0003677|GO:0006355
Aip08g02375 350 Gene3D NAC domain 19 165 IPR036093 GO:0003677|GO:0006355
Aip08g02375 350 ProSiteProfiles NAC domain profile. 10 160 IPR003441 GO:0003677|GO:0006355
Aip08g02375 350 Pfam No apical meristem (NAM) protein 11 140 IPR003441 GO:0003677|GO:0006355
Aip08g02375 350 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 315 - -
Aip08g02375 350 PANTHER PROTEIN SOMBRERO 6 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02375 Aip-Chr8 101154568 101159210 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip08g02375 NAM 8.3e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02375 08 101154568 101159210 Aip08g02375 08 101154568 101159210 ECH