Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02217 ATGGATGCTAGGAGCATCGCTTCCCAGCTTAACAGCTCTGGTTTGTTGAAAACTCAGGGTCTAATTGGAGGTAAATGGAGTGATTCCTACGATGGGAAAACCATAAAGGTTTATAATCCAGCAACAGGTGAATCTATAGCAGATGTCGCATGCATGGGCGGAAAAGAGACAAATGATGCGATTGCTTCAGCATATGATGCATATAGATCATGGAGCAAAACCACTGCTGCTGAGAGAAGCAAACTTTTGAGGAAATGGTATGATTTACTAATGGCTCATAAAGAAGAGCTTGCTCAACTTATGACCTTGGAGCAAGGGAAGCCTCTTAAGGAGGCTATGGGTGAGGTAAACTATGGGGCTGGCTTTATTGAATTTTCAGCTGAGGAGGCTAAACGCATATATGGGGATATAATTCCTGCTCCTATGTCTGATCGACGGTTATTTGTTCTAAAGCAGCCTGTCGGTGTTGTAGGTGCAATCACACCATGGAACTTCCCCCTGGCTATGATCACACGGAAGGTTGGTCCAGCTCTTGCATGTGGATGTACAGTGGTCATAAAGCCCTCTGAACTTACACCTCTCACTGCATTAGCTGCAGCCGAACTTGCTATTCAAGCTGGAATACCTCCGGGTGCTGTGAATGTGGTTATGGGAAATGCTCCTGAAATTGGGGATGCTTTACTTGCAAGTCCTCAGGTACGCAAAATCACATTCACAGGCTCAACAGCTGTTGGAAAGAAATTGATGGCAGGTTCTGCTGAGACAGTAAAAAAAGTATCTCTGGAACTTGGTGGCAATGCACCATGCATAATTTTTGATGACGCTGACATTGATATTGCAGTTAAAGGAACTCTTGCAGCAAAGTACCGCAATAGTGGACAAACATGTGTGTGTGCGAACAGAATTCTTGTGCAAGAAGGTATATATGATAAATTTGCAAAGGCTTTGATTGATGCTGTTCGGAATATGAAAGTTGGGGATGGTTTTGGTGAAGATGTTGTTCAGGGCCCTTTGATCAATGAAGCTGCAGTTGAAAAGGTTGAGACCTTGCTTCAAGATGCTACATCAAAGGGGGCAAAGGTAATGCTTGGGGGTAAAAGACATAGCCTTGGATTTACCTTTTATGAACCAACAGTTGTCGGTGATGTCAACAGTGATATGCGCATATCAAGAGAGGAAGTGTTTGGACCTGTTGCACCCCTTTTGAGGTTCAAAACCGAAGAGGATGCTATCCGAATTGCCAATGACACAAATGCAGGTTTGGGTTCATATGTGTTTACAAACAGTATCCAACGCTCATGGCGTGTTGCCGAGGCTCTCGAATATGGACTTGTTGGTGTTAATGAAGGAGTAATCTCAACTGAGGTGGCACCATTTGGTGGTTTTAAACAGTCGGGGCTTGGAAGAGAAGGCTCAAAGTATGGGATGGATGAATATTTGGAGATCAAGTATGTGTGCCTGGGAAACATGAAGAAAGAATAA 1482 0.4386 MDARSIASQLNSSGLLKTQGLIGGKWSDSYDGKTIKVYNPATGESIADVACMGGKETNDAIASAYDAYRSWSKTTAAERSKLLRKWYDLLMAHKEELAQLMTLEQGKPLKEAMGEVNYGAGFIEFSAEEAKRIYGDIIPAPMSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELAIQAGIPPGAVNVVMGNAPEIGDALLASPQVRKITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIIFDDADIDIAVKGTLAAKYRNSGQTCVCANRILVQEGIYDKFAKALIDAVRNMKVGDGFGEDVVQGPLINEAAVEKVETLLQDATSKGAKVMLGGKRHSLGFTFYEPTVVGDVNSDMRISREEVFGPVAPLLRFKTEEDAIRIANDTNAGLGSYVFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDEYLEIKYVCLGNMKKE 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02217 493 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 289 300 IPR016160 GO:0016491
Aip08g02217 493 TIGRFAM SSADH: succinate-semialdehyde dehydrogenase 37 483 IPR010102 GO:0009013|GO:0009450
Aip08g02217 493 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 13 490 - -
Aip08g02217 493 CDD ALDH_F5_SSADH_GabD 37 487 - -
Aip08g02217 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 32 479 IPR016162 GO:0016491
Aip08g02217 493 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 261 268 IPR029510 GO:0016491
Aip08g02217 493 Pfam Aldehyde dehydrogenase family 26 485 IPR015590 GO:0016491
Aip08g02217 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 265 454 IPR016163 GO:0016620
Aip08g02217 493 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 13 490 - -
Aip08g02217 493 SUPERFAMILY ALDH-like 15 490 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02217 Aip-Chr8 91866474 91877159 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02217 08 91866474 91877159 Aip08g02217 08 91866474 91877159 ECH