Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02163 ATGGCCACGTCAGCATCCCCAACGACTTTCTCTCTCCTCTCTTCAACCACCAACTCCTCCACTTCCTCATCCTCCACTCGCTCCTCCCTCCTCCACCTCTCTCCCACCACCACATCTGGTGGCCTCCGCCTCCGCTCAGCCGGCCTCCGCCGCCTGGGCTTCGCCGCGGCGGACCCGCTCCTGGCCCTCCACGTGGCATCAAGGATCAGCTCGGCGTCGTCCGGGAAGGGAGTGAGGGGCGTTGTTTCCATGGCGAAGAAGAGCGTTGGGGACTTGACTGCTGCTGACTTGAAAGGAAAGAGAGTGTTCGTTAGGGCTGACCTTAACGTGCCACTTGATGATAACCAGAACATCACCGACGACACTAGGATCCGTGCCGCCATTCCCACCATCAAGCACCTCATCCAGAATGGTGCCAAAGTCATTCTCTCCAGTCATTTGGGACGACCGAAGGGTGTCACTCCCAAGTTCAGCTTGGCACCTCTTGTACCCCGTCTTTCTGAACTCATTGGTATCCAGGTTGTCAAGGCTGATGACAGTATTGGTCCCGAAGTAGAGAAGTTGGTGGCTTCACTTCCTCATGGAGGTGTTCTTCTTCTGGAAAACGTGAGGTTTTACAAGGAGGAAGAAAAGAATGACCCCGAGCATGCGAAGAAGCTTGCTGCTCTTGCAGATCTATATGTTAATGATGCATTTGGTACTGCTCACAGGGCACATGCATCAACAGAGGGAGTCACTAAATTCCTCAAGCCATCCGTTGCTGGTTTTCTTTTGCAAAAGGAACTTGACTACCTTGTTGGGGCTGTATCAAACCCAAAGAGGCCATTTGCTGCCATTGTGGGTGGTTCCAAGGTCTCATCCAAAATTGGAGTGATTGAATCCCTTCTCGAAAAATGTGACATCCTTCTACTTGGAGGAGGTATGATCTTCACATTTTACAAGGCACAAGGTCTCTCAGTTGGTTCTTCCCTTGTAGAGGAAGATAAGTTAGATCTTGCTACATCTCTCCTTGCAAAAGCTAAGGCAAAGGGCGTGTCTCTCTTGTTACCATCTGACGTGGTGATTGCAGACAAATTCGCTCCCGATGCAAACAGCAAGGTTGTGCCAGCGTCTGCGATTCCTGACGGTTGGATGGGCCTGGATATTGGTCCAGAGTCTATTAAAACATTCAACGAAGCATTGGAAACTACCAAAACCATTATATGGAATGGACCAATGGGAGTCTTTGAGTTTGACAAATTTGCTGTTGGGACAGAGGCTATTGCAAAGAAGCTGGCTGATCTCAGCGGAAAGGGTGTGACCACAATTATTGGAGGAGGAGATTCCGTTGCGGCCGTGGAGAAAGTGGGAGTTGCAAATGTCATGAGCCACATATCCACAGGTGGTGGTGCCAGTTTGGAGTTGCTGGAAGGAAAAGAGCTTCCTGGTGTCCTTGCCCTCGATGAAGCCACACCAGTTGCCGTGTAA 1467 0.5092 MATSASPTTFSLLSSTTNSSTSSSSTRSSLLHLSPTTTSGGLRLRSAGLRRLGFAAADPLLALHVASRISSASSGKGVRGVVSMAKKSVGDLTAADLKGKRVFVRADLNVPLDDNQNITDDTRIRAAIPTIKHLIQNGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELIGIQVVKADDSIGPEVEKLVASLPHGGVLLLENVRFYKEEEKNDPEHAKKLAALADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLDLATSLLAKAKAKGVSLLLPSDVVIADKFAPDANSKVVPASAIPDGWMGLDIGPESIKTFNEALETTKTIIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVANVMSHISTGGGASLELLEGKELPGVLALDEATPVAV 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02163 488 Hamap Phosphoglycerate kinase [pgk]. 91 482 IPR001576 GO:0004618|GO:0006096
Aip08g02163 488 SUPERFAMILY Phosphoglycerate kinase 91 482 IPR036043 GO:0004618|GO:0006096
Aip08g02163 488 ProSitePatterns Phosphoglycerate kinase signature. 101 111 IPR015911 GO:0004618|GO:0006096
Aip08g02163 488 PRINTS Phosphoglycerate kinase family signature 96 112 IPR001576 GO:0004618|GO:0006096
Aip08g02163 488 PRINTS Phosphoglycerate kinase family signature 118 140 IPR001576 GO:0004618|GO:0006096
Aip08g02163 488 PRINTS Phosphoglycerate kinase family signature 195 210 IPR001576 GO:0004618|GO:0006096
Aip08g02163 488 PRINTS Phosphoglycerate kinase family signature 223 245 IPR001576 GO:0004618|GO:0006096
Aip08g02163 488 PRINTS Phosphoglycerate kinase family signature 254 276 IPR001576 GO:0004618|GO:0006096
Aip08g02163 488 PRINTS Phosphoglycerate kinase family signature 277 296 IPR001576 GO:0004618|GO:0006096
Aip08g02163 488 PRINTS Phosphoglycerate kinase family signature 399 424 IPR001576 GO:0004618|GO:0006096
Aip08g02163 488 PRINTS Phosphoglycerate kinase family signature 435 446 IPR001576 GO:0004618|GO:0006096
Aip08g02163 488 PRINTS Phosphoglycerate kinase family signature 458 475 IPR001576 GO:0004618|GO:0006096
Aip08g02163 488 Gene3D - 269 482 IPR015824 GO:0004618|GO:0006096
Aip08g02163 488 PANTHER PHOSPHOGLYCERATE KINASE 1 483 - -
Aip08g02163 488 CDD Phosphoglycerate_kinase 92 482 IPR001576 GO:0004618|GO:0006096
Aip08g02163 488 PANTHER PHOSPHOGLYCERATE KINASE 1 483 IPR001576 GO:0004618|GO:0006096
Aip08g02163 488 Pfam Phosphoglycerate kinase 94 472 IPR001576 GO:0004618|GO:0006096
Aip08g02163 488 MobiDBLite consensus disorder prediction 1 39 - -
Aip08g02163 488 Gene3D - 90 266 IPR015824 GO:0004618|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02163 Aip-Chr8 87559688 87563596 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02163 08 87559688 87563596 Aip08g02163 08 87559688 87563596 ECH