Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02072 ATGCCCCTCTCTACTATGGCTTCTTCAATCCCTCATCATCAGTTCTATTCAAACTACACGTTCACTACCGATCTTGTTGATTTTCCTTATCATGCACCCAACAATAACAACAACAACGCTTCATCAATCATTATGGACAATTTCGCTATATGGGGTAGTGGCCAAGATTGCTTCTTCATTAACAACCACAACAACATCACCAACTCTTTGATTATTGATAATGAAGCACTTGATTGTGACACCATGAATTCTTCTTCTTGGGCAGTGCCAAGTTTCGCGGAGCAACTTGGCGGTGGTGGTGTTTCATCCGATATGGCTGTGCCGGCCATCTCTGACTGTAAAATGGGCTTCTATGGCGGCGCCACTGCCGGATTTCAAGACTTCAGCAGCGGCTACCGGCCTGGTCTTGGCAATTTTGGAGAAGAATGTTGTGGTTTCAAGGAGGATATTAAACAGCCTACTTATTCTAACGCTACAAGAGAGAATTGGGGAATTCAAGGAAATCAAATGCCAGCAATTGAAGAACCTAACATAAAGGTAGGAAGGTACTCAGAGGAAGAAAGGAAGGAAAGGATTCTCCGATATTTGAAGAAAAGAAATCAAAGAAACTTTAACAAAACCATCAAGTATGCATGCCGGAAAACGTTAGCCGATAGGCGAGTTCGAGTTCGGGGAAGGTTTGCAAGGAACAATGAGCTGTTATGTGAGGAAGACATGGCTACAAAGAAGAATGAGAATCATCATCATCATCATCATCATGATTTGAAAGAAGAGTTTTATGGTGGTGAATCAATCCAGTTCCAGTTAAAGAATGATGAGGAGGATTGGTTGCAAGAAGCCATGGCAAGTTTGGTCTATTTATCTCACTCTTCACCAGAAGACATGTAG 888 0.4223 MPLSTMASSIPHHQFYSNYTFTTDLVDFPYHAPNNNNNNASSIIMDNFAIWGSGQDCFFINNHNNITNSLIIDNEALDCDTMNSSSWAVPSFAEQLGGGGVSSDMAVPAISDCKMGFYGGATAGFQDFSSGYRPGLGNFGEECCGFKEDIKQPTYSNATRENWGIQGNQMPAIEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELLCEEDMATKKNENHHHHHHHDLKEEFYGGESIQFQLKNDEEDWLQEAMASLVYLSHSSPEDM 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02072 295 PANTHER ACTIVATOR OF SPOMIN::LUC2 6 290 - -
Aip08g02072 295 ProSiteProfiles CCT domain profile. 188 230 IPR010402 GO:0005515
Aip08g02072 295 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 6 290 - -
Aip08g02072 295 Pfam CCT motif 188 230 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02072 Aip-Chr8 69815209 69818011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02072 184 232 C2C2-CO-like Transcription Factor Family AT5G57660 51.020 5.40e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip08g02072 CCT 9.4e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02072 08 69815209 69818011 Aip08g02072 08 69815209 69818011 ECH