Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01956 ATGGAGAATAACCAATGGCGTCTCTATGAAGATGACCCACTTCTTCTCACCGACGTTTCTTTACAACAAGAAACTGAAACCTATTCCACTAACTGCTCCAACTACGTTGATTCACACGCATCGCTGAGCTCTGGTTGTTCAGCTATGGCTGCAGATCCCGAATCTTGTGGTGGAAGCCCAAGCTATGGATTCCAAGGGAACAGTGGACGCTTTGAAAGGAATAGTGTAGAATTTGATGATCCAGTTGTGAGAACTGTTCTTGATGGTAGATCAATGTTGGGGTATTCTCTGACTTCACCAGATTTGGTGATATGTGCTGGATCACCAGAGATTGCTCGAATCAGCTATGGTGATTCCCCAGAGGTATTTTGTAACAAGAACTGCAAGAATTTGGAGTCATCCATGGAGCTTTCCCTAGAGAACGGAATCAATGGCTCTGAAGTTGACAATGGCCACAAGACCCCTACTGTTAAATTCTCTAACTTTTGTCAAACTTTTACACATGATGATGTGATTGTGCCCCCTGATGCTTCCTTTGAGCTTCTTCCACCGCCTTTGACTGCAGACGAGTCACCCCTAAATTACCCTCCAAGAGAAAATGAAATGCTAGAAGATATTTGTGTATCTCAGGATGCTGAGTTGGAATCCTCAGAAGATACCGAAAATATTGGGGTGGAAGAGAAGTATGAGAAGCTGAAAAAAGTGCTGGCAGAAACAAGGAGGGAGTTGAAAATGATTAGAAGGGAGAATGAGCAGAAGAGCAAGGAATGCCAAGAAGCTTGGAACTCTCTGAAAGAGCTACAGAATGAGCTCATGCGCAAGTCGATGCACGTAGGATCATTGGCGTTTGCCATAGAGGGGCAAGTGAAAGAGAAAAGCAAGTGGTTTTCATCATTAAGAGACTTGATGAGGAAATTAAAGATCATGAAAATGGAGCACATCAAGCTCTTAGAGGAAGCAGAGGCATACAGGAAATGTCAAGCAGAAATCAGCGAAATGGGGTTAATGATAAATGCCAAACTCAATGAACAACAAGAATCTCATGAAGATCTCAAGTTCAAATATATCGAGGGGGAAAAGGAACGAAAAGAACTTTACAACAAGGTTTTGGAATTGAGAGGAAACATACGAGTCTTTTGCAGGTGTAGGCCCCTTAACGCTGAAGAGTTAGCAGCAGGAGCCACAATGGCCATAGATTTTGAATCTGCGAAAGATGGTGAGCTAACTGTAATGTCAAATGGTGCTCCTAGAAAGACTTTTAAGTTTGATGCTGTCTTTGGCCCCCAAGCTGAACAAGCTGATATCTTCGAAGACACGGCACCATTTGCAACCTCAGTTCTAGATGGATACAATGTTTGCATTTTTGCATACGGGCAGACTGGAACCGGGAAGACTTTCACAATGGAGGGCACTGAGGAGGCTCGTGGAGTTAATTTCAGGACTCTTGAGAAAATGTTTGACATAATCAGGGAGAGACAGACACACTACAGTTACGATGTATCAGTAAGTGTTTTAGAAGTGTACAATGAACAAATCAGAGATTTGCTGTTTTCAGGAAATCAGCCAGGAGCAACTGCTAGAAGATTGGAAATAAGGCAAGTCGGTGAAGGAATGCATCATGTTCCTGGGTTAGTTGAGGCTCATGTGAACAATATGAGTGAAGTCTGGGAAGTCCTGCAAACTGGTAGCAATGCAAGGGCTGTAAGCTCAACCAATGCGAATGAACACAGCAGTAGATCCCACTGCATTCATTGTGTTATGGTTAAAGGGGAGAACTTGTTGAATGGGGAATGCACAAGAAGCAAGTTATGGCTGGTGGACTTAGCAGGAAGCGAGCGAGTGGCCAAGACAGATGTCCAAGGCGATCGACTGAAGGAGGCACAAAACATTAACAGGTCTTTGTCAGCACTTGGAGATGTCATATCTGCCCTTGCAACAAAAAGTCCGCATATCCCTTTCAGGAACTCGAAACTTACGCATTTGCTTCAAGACTCATTAGGAGGGGATTCAAAGGCACTCATGTTCGTGCAAATTAGTCCTAATGAAACTGATTTGGGCGAGACAGTTTGCTCTCTGAACTTTGCTAGTCGAGCAAGGGGAATAGAACTCGGCCCTGCCAAAAAGCAGTTGGACACTGTTGAACTTCTTAGACACAAGCAGATGGCTGAGAAAACCAAACAAGAGGCAAAGCTGAAGGAGTTCCAACTCAAGAAGATGGAGGAAACAATCCATGTATTAGAGTCCAAGATGAAAGAAAGAGATAATAAAAACAAGAGCCTCCATGACAAGGTCAAGGAACTGGAAGCACAACTTCTCATCGAAAGAAAGCTGGCGCGACAACATGTGGATTCGAAAATAGCCGAGCAGCACCAAATGAAGCAACAAGAAGAACCAAACAGTGCACTTCCGAGGCCATCGCTTGTGAATCGACCACTAAGTATCAACAAGAATTTCAATGATCCGGTGAGTGGTGGATGGTGCAAGGACCAAGTAAATTCTGCTAAACCACTCACGGAAAACAACTTCTTAAAGCCTCTAATACCCTTTTCCACAATAGAGAACTCCATCAAGTGTATTGATCATGCCGAAAAGGAAAACAACCCTGAGATGGCCGAGAAACTCCTACTGCCAAAACGGTCTGGAAGAGCTTCTATCTGCACAATGACACCACGTGTTCCTTCCGCCATTGCTGCAAGGCGTAACTCTCTCATTCCACTCCCAAGCATACCAAGCTTAACTCAGTTCCAATCGCCACTGCTACCTATAGCCGCGAACCAAGCCACAGATCATAAAGATGTAAATAGAGAATTAGACACCAAGTTTGTGCTGGCAGAACAGACACAATGTGAGAGTCCTAAGGAAGTAAGAAGTGGTGTTAAGAAGATAGGTAGCATACTAAGAAGAAGCCTTCATAAGAAGATACAAGTGAAGTCTCCACAAATGAGAAGGGTTGGTGTAAATGTAGGGATGGAGAAGGTTAGAGTTTCCATTGGAAGTAGAGGGAGATTGGGACAAAGGGTGCAAGTTGGAAGTGCTAGAAGAGGTAAGGAGATCCAACAAAAGAATAGTCAAAAGGAAAAGGAAAGAGGTTGGATATGA 3099 0.4376 MENNQWRLYEDDPLLLTDVSLQQETETYSTNCSNYVDSHASLSSGCSAMAADPESCGGSPSYGFQGNSGRFERNSVEFDDPVVRTVLDGRSMLGYSLTSPDLVICAGSPEIARISYGDSPEVFCNKNCKNLESSMELSLENGINGSEVDNGHKTPTVKFSNFCQTFTHDDVIVPPDASFELLPPPLTADESPLNYPPRENEMLEDICVSQDAELESSEDTENIGVEEKYEKLKKVLAETRRELKMIRRENEQKSKECQEAWNSLKELQNELMRKSMHVGSLAFAIEGQVKEKSKWFSSLRDLMRKLKIMKMEHIKLLEEAEAYRKCQAEISEMGLMINAKLNEQQESHEDLKFKYIEGEKERKELYNKVLELRGNIRVFCRCRPLNAEELAAGATMAIDFESAKDGELTVMSNGAPRKTFKFDAVFGPQAEQADIFEDTAPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEEARGVNFRTLEKMFDIIRERQTHYSYDVSVSVLEVYNEQIRDLLFSGNQPGATARRLEIRQVGEGMHHVPGLVEAHVNNMSEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGECTRSKLWLVDLAGSERVAKTDVQGDRLKEAQNINRSLSALGDVISALATKSPHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNETDLGETVCSLNFASRARGIELGPAKKQLDTVELLRHKQMAEKTKQEAKLKEFQLKKMEETIHVLESKMKERDNKNKSLHDKVKELEAQLLIERKLARQHVDSKIAEQHQMKQQEEPNSALPRPSLVNRPLSINKNFNDPVSGGWCKDQVNSAKPLTENNFLKPLIPFSTIENSIKCIDHAEKENNPEMAEKLLLPKRSGRASICTMTPRVPSAIAARRNSLIPLPSIPSLTQFQSPLLPIAANQATDHKDVNRELDTKFVLAEQTQCESPKEVRSGVKKIGSILRRSLHKKIQVKSPQMRRVGVNVGMEKVRVSIGSRGRLGQRVQVGSARRGKEIQQKNSQKEKERGWI 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01956 1032 Coils Coil 722 770 - -
Aip08g01956 1032 MobiDBLite consensus disorder prediction 1018 1032 - -
Aip08g01956 1032 PANTHER KINESIN-LIKE PROTEIN KLP-3 216 1020 - -
Aip08g01956 1032 Coils Coil 299 319 - -
Aip08g01956 1032 ProSitePatterns Kinesin motor domain signature. 601 612 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aip08g01956 1032 PRINTS Kinesin heavy chain signature 449 470 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip08g01956 1032 PRINTS Kinesin heavy chain signature 571 588 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip08g01956 1032 PRINTS Kinesin heavy chain signature 602 620 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip08g01956 1032 PRINTS Kinesin heavy chain signature 651 672 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip08g01956 1032 PANTHER KINESIN-LIKE PROTEIN KIN-14Q 216 1020 - -
Aip08g01956 1032 CDD KISc_C_terminal 373 703 - -
Aip08g01956 1032 SMART kinesin_4 373 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip08g01956 1032 Gene3D Kinesin motor domain 319 703 IPR036961 -
Aip08g01956 1032 MobiDBLite consensus disorder prediction 787 806 - -
Aip08g01956 1032 ProSiteProfiles Kinesin motor domain profile. 375 701 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip08g01956 1032 Pfam Kinesin motor domain 381 701 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip08g01956 1032 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 375 738 IPR027417 -
Aip08g01956 1032 MobiDBLite consensus disorder prediction 1004 1032 - -
Aip08g01956 1032 Coils Coil 222 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01956 Aip-Chr8 54935775 54941679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01956 317 729 Calmodulin-binding Proteins AT5G65930 41.346 3.00e-84 295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01956 08 54935775 54941679 Aip08g01956 08 54935775 54941679 ECH