Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01927 ATGATGGTAGAGGACACATTCTTGTTCCCGCCAGATACAGATCTTGATCTTAGTTTCACAAGCACCACCACTGACCGTACCTTCACCACGGCCTCCTCCTCCGCCCGCACCTCCCTAACACGCACCAGCAGTCTCACCCTCAGCTTCAGCTTCAACGACCGTCTCTCCGCCGCATCCGCCTCCGCTACAACCTCATCTGCCTCCGTCCTCCGCCGTCCCCACCGCAGCTCCGACCCACACTGGTCCGCAATCCGCGCTGCCACCGCCCTCTCCTCCGACGGCCGCCTCCACCTACGACATCTCAAGATCCTCGGCCATCTCGGCACCGGAAACCTTGGCCGCGTCTTCCTCTGCCGCCTCCGTGACGATCACCATGGCGGCGCCACCTTCGCCCTCAAGGTCGTTGACAAAGACCTCCTAAACGCCAAGAAACTCTCCCACGTAGAAACCGAGGCAGAAATCCTCCACGCGCTAGACCACCCTTTCCTTCCCACGCTCTACGCGCGCATCGATGCTTCTCACTACACTTGCCTCCTCATCGACTACTGCCCCAACGGAGACCTCCATTCCCTCCTCCGCAAACAGCCCGGCAACCGGCTCTCTCTCCGGGCGGTTCGATTCTTCGCAGCGGAGGTTCTCGTCGCGCTCGAGTACCTCCATGCGCTAGGAATAGTTTACAGAGATCTCAAACCAGAGAACGTTCTGTTACGCGAGGACGGTCACGTCATGCTCTCGGATTTCGATCTCTGCTTTAAAGCTGACGTGGCACCTGTTTTCGAGCGTAGGTCACATTCCCCGAGACTAACAACAAACTCAAGAAACCGTTGTTTCTGTTATAACAACTATAGCAACAAATCTCGATTTACGGAGCGCGTGGTGGCGGAGTTTGTTGCGGAACCAACAACGGCGTTTTCACGATCGTGTGTTGGGACCCACGAGTATCTCGCTCCAGAGCTTGTTTCTGGTAACGGTCATGGTAACGGCGTGGATTGGTGGGCTTTTGGGATTTTCATCTATGAACTTTTGTATGGTACGACGCCGTTTAAGGGGTATAGTAAAGAGAGCACGCTGCGCAATATAGCATCCAGCAGGGACGTGAGATTTTACGTTAATGAGAGAGAGGAATTGGAGGAAGGGATAAGTGAAGCTAGGGATTTGATTGAGAAGCTTTTGGTGAAGGATCCGAGGAGGAGGCTAGGGTGCGCCAGAGGTGCAACGGATATTAAACGGCACCCGTTTTTTGATGGGATAAAGTGGCCGTTGATTCGGACGTACAAGGCACCGGAGGTGAGGGGGTTGGTGAAGAGGAGTAGGTCGTTGCAGCACGTGACTAGTCACGTGACACATGGTAGAAGGAGAAAGTGGTGGTGGAAAGCGCTTGAGTATGTGATGAGGAAGAAGGGGAACAAATATAATTCGAATACAAACTATAGTAATGGGAATTATTATCATTTTGTTAATTGTTATAAAGTTAGGTAA 1479 0.5314 MMVEDTFLFPPDTDLDLSFTSTTTDRTFTTASSSARTSLTRTSSLTLSFSFNDRLSAASASATTSSASVLRRPHRSSDPHWSAIRAATALSSDGRLHLRHLKILGHLGTGNLGRVFLCRLRDDHHGGATFALKVVDKDLLNAKKLSHVETEAEILHALDHPFLPTLYARIDASHYTCLLIDYCPNGDLHSLLRKQPGNRLSLRAVRFFAAEVLVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLCFKADVAPVFERRSHSPRLTTNSRNRCFCYNNYSNKSRFTERVVAEFVAEPTTAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGIFIYELLYGTTPFKGYSKESTLRNIASSRDVRFYVNEREELEEGISEARDLIEKLLVKDPRRRLGCARGATDIKRHPFFDGIKWPLIRTYKAPEVRGLVKRSRSLQHVTSHVTHGRRRKWWWKALEYVMRKKGNKYNSNTNYSNGNYYHFVNCYKVR 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01927 492 ProSiteProfiles Protein kinase domain profile. 101 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01927 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Aip08g01927 492 Gene3D Phosphorylase Kinase; domain 1 100 186 - -
Aip08g01927 492 Pfam Protein kinase domain 305 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01927 492 Pfam Protein kinase domain 103 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01927 492 PANTHER FLIPPASE KINASE 1-RELATED 8 475 - -
Aip08g01927 492 Coils Coil 366 393 - -
Aip08g01927 492 Gene3D Transferase(Phosphotransferase) domain 1 306 433 - -
Aip08g01927 492 Gene3D Transferase(Phosphotransferase) domain 1 187 253 - -
Aip08g01927 492 PANTHER SERINE/THREONINE-PROTEIN KINASE WAG2 8 475 - -
Aip08g01927 492 SUPERFAMILY Protein kinase-like (PK-like) 80 437 IPR011009 -
Aip08g01927 492 CDD STKc_phototropin_like 99 430 - -
Aip08g01927 492 Gene3D Phosphorylase Kinase; domain 1 434 446 - -
Aip08g01927 492 SMART serkin_6 101 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01927 Aip-Chr8 53105991 53107678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01927 2 487 AGC Kinase Gene Family AT3G14370 66.937 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aip08g01927 Pkinase 1.3e-32 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01927 08 53105991 53107678 Aip08g01927 08 53105991 53107678 ECH