Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01906 ATGGCAATTGATGAGGTGGTTCTGCTTGATTTTTGGTCGAGCCCTTTTGGTTTGAGGGCAAGGATTACACTTGCTGAAAAGGGTATTAAGTATGAGTACAAAGAAGAAGACCTGAGGAATAAGAGCAGTCTTCTCCTTGAGATGAACCCGGTTCACAAGAAAATACCGGTTCTTATCCACAATGGGAAATCTATTTGCGAGTCTCTAAATATTGTTCAATATATTGATGAAGTGTGGAATGATAGATCTCCTTTGTTGCCTTCTGATCCTTATCAAAGAGCTCAGGCTAGATTTTGGGCTGACTATGTTTTCCCTGCTCAGAAGAAGTTAGCTTTTGCGACAAAAGAAGAAAAAGAATCTGCAGAGAAAGAATTCTTGGATGCCCTTAAATTGTTGGAGGAGCAATTGGGTGACAAGGATTATTTTGGAGGAGACAAGTTTGATTTTGTGGACATAGCATTTGCTCCATACTATAGTTTTTTCAAAATCTACGAGATTGTTGGGAACTTCAAAATGGAAGAAGAGTTCCCTAAGATTTGTGCTTGGGCGAAGAGGTGCATGCAAAAGGAAAGTGTTTCCATGTCTCTCCCTGACTCGCAAAAGGTCCTTGGGTTTTTTATGGAGATGAGGAAGAACTTCTTAGGAACAGAGTAG 654 0.4021 MAIDEVVLLDFWSSPFGLRARITLAEKGIKYEYKEEDLRNKSSLLLEMNPVHKKIPVLIHNGKSICESLNIVQYIDEVWNDRSPLLPSDPYQRAQARFWADYVFPAQKKLAFATKEEKESAEKEFLDALKLLEEQLGDKDYFGGDKFDFVDIAFAPYYSFFKIYEIVGNFKMEEEFPKICAWAKRCMQKESVSMSLPDSQKVLGFFMEMRKNFLGTE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01906 217 Pfam Glutathione S-transferase, N-terminal domain 7 77 IPR004045 -
Aip08g01906 217 Gene3D Glutaredoxin 2 88 - -
Aip08g01906 217 Pfam Glutathione S-transferase, C-terminal domain 113 189 IPR004046 -
Aip08g01906 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 210 IPR045073 -
Aip08g01906 217 SUPERFAMILY GST C-terminal domain-like 77 212 IPR036282 -
Aip08g01906 217 Coils Coil 115 135 - -
Aip08g01906 217 CDD GST_N_Tau 6 79 - -
Aip08g01906 217 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 5 210 - -
Aip08g01906 217 SFLD Main.3: Omega- and Tau-like 4 214 IPR045073 -
Aip08g01906 217 SUPERFAMILY Thioredoxin-like 6 103 IPR036249 -
Aip08g01906 217 Gene3D - 89 215 - -
Aip08g01906 217 SFLD Main (cytGST) 4 214 - -
Aip08g01906 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Aip08g01906 217 CDD GST_C_Tau 90 209 IPR045074 GO:0004364|GO:0006749
Aip08g01906 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 64 205 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01906 Aip-Chr8 50911742 50913005 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01906 4 213 Glutathione S-transferase Gene Family AT1G78340 62.150 8.10e-98 282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01906 08 50911742 50913005 Aip08g01906 08 50911742 50913005 ECH