Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01897 ATGGCAGATGAGGTGGTTCTACTAGATCGCTGGCCTAGCCCTTATTGCATGAGGGTGAGAATTGCATTGGCGTTGAAAGGTGTGATATGTGAGATCAAAGATGAAGATTTGAGTAATAAGAGCACTCTATTGCTACAAATGAACCCAGTTCATAAGAAGGTTCCGGTTCTCATCCACAATGGAAAACCTATTTGCGAGTCTCTTATTATTGTTGAGTATATTGATCAAGTTTGGAATGAAAAACCTCCCTTGCTTCCTTCTGACCCTTATCAAAGGGCTCATGCTAAGTTTTGGGCTGATTTTTCTGACAAAATGATATTGAACAAGTCAATGAGCCTATTGACCTCAAAAAGAGAAGAGCTGGAGGTTGCCACAAAGGAATTCAAAGAAAACCTAAAATTGTTGGAAGAACAACTAGGAGACAAGCATTATTTTGGAGGTGAAGAACTTGGTTTTTTGGATGTAGCACTTCTTCCAATCATAACTGGATTTAAAACTAGGGAGATTTATGGCAAATTCAAGATTGAAGATGAGTTCTCAAAGCTTTTTGCTTGGGCCAATAGGTGCCTTCAAAAAGAGAGTGTTTCCAAGTCAATTCCTGATCAAGAGAAGATGTATGGTTTAATTGTGGAGATGAGAAAGAAGTTTGGAGTTGAGTAG 660 0.3879 MADEVVLLDRWPSPYCMRVRIALALKGVICEIKDEDLSNKSTLLLQMNPVHKKVPVLIHNGKPICESLIIVEYIDQVWNEKPPLLPSDPYQRAHAKFWADFSDKMILNKSMSLLTSKREELEVATKEFKENLKLLEEQLGDKHYFGGEELGFLDVALLPIITGFKTREIYGKFKIEDEFSKLFAWANRCLQKESVSKSIPDQEKMYGLIVEMRKKFGVE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01897 219 Pfam Glutathione S-transferase, C-terminal domain 124 188 - -
Aip08g01897 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 213 IPR045073 -
Aip08g01897 219 Coils Coil 118 138 - -
Aip08g01897 219 Pfam Glutathione S-transferase, N-terminal domain 7 76 IPR004045 -
Aip08g01897 219 CDD GST_N_Tau 5 78 - -
Aip08g01897 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Aip08g01897 219 Gene3D Glutaredoxin 1 87 - -
Aip08g01897 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Aip08g01897 219 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Aip08g01897 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Aip08g01897 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Aip08g01897 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Aip08g01897 219 Gene3D - 88 219 - -
Aip08g01897 219 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Aip08g01897 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01897 Aip-Chr8 50628993 50630550 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01897 1 219 Glutathione S-transferase Gene Family AT1G17180 57.078 2.48e-89 260
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01897 08 50628993 50630550 Aip08g01897 08 50628993 50630550 ECH