Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01845 ATGCAATACTCGTACATGAGAAACTGTAGCAATAACAGAGCAGCCACATTCTCACCGCCGGTGGTGACCATTCCCATAGTGGACCTTTCAAAACCTGATGCACAGGCCCTCATAGTGAAGGCCTGTGAAGACTTCGGGTTTTTCAAAGTCATAAACCACGGCGTCCCTATGGACGCCATTTCCCTCCTCGAAGAGGAGGCTACCAAATTCTTCTCCTTGCCGCTTAGCGACAAGGAGAAGGTCGGCCTTGCCAACCCCTTCGGGTACGGCAACAAGCGCCTCGGTTACAACGGCGACATCGGTTGGATCGAGTACCTTCTCCTTAAAACCAATTCACAACACTCCAACACTCTCACACTACCTTCTGATCAAAACCTAGAGCAATTCAGGTGTGCTTTGAACGAGTACATGCAAGCGATGAGGAAGATGGCGTGCGAGGTTCTTGAGTTAATGGCGGAAGGGCTGAAGATTGAGGAACGAAACGTGCTGAGCAAGCTTGTGATGGATGAACAGAGTGACTCTGCTTTCAGGGTGAACCACTACCCTGCTTGCCCTGAAATAACAATGGCTTCCAATGGCGGAGGTGGTGGTGATGAGAACAAGAACAAGAACAAGAACGACACCACTAACATGGTTGGTTTTGGAGAGCACACTGACCCACAAATAATTTCTCTTCTGAGATCCAATAACACCTCTGGCCTTCAGATTTATGTTGGTGATGGAAACTGGATTCCTGTTCCTCCTGATCACAGTTCCTTCTTTGTCAATGTTGGTGATTCACTTCAGGTTATGACGAATGGACGGTTCAAGAGTGTGAGGCACAGAGTGATAGTGGACAACGGTTGCAAATCAAGGCTATCAATGATTTACTTTGTTGGTCCACCATTGAGTGAGAAGATTGCACCATTGCCTTCCCTCATGCTTGGAAAGGAAAGCTTATACAAAGAGTTCACTTGGTTTGAATACAAGAACGCTGCCTACGCTACAAGATTGGCTACCAATAGGCTCATACCCTATGAGAAGATTGCTGCCTCTTAA 1038 0.473 MQYSYMRNCSNNRAATFSPPVVTIPIVDLSKPDAQALIVKACEDFGFFKVINHGVPMDAISLLEEEATKFFSLPLSDKEKVGLANPFGYGNKRLGYNGDIGWIEYLLLKTNSQHSNTLTLPSDQNLEQFRCALNEYMQAMRKMACEVLELMAEGLKIEERNVLSKLVMDEQSDSAFRVNHYPACPEITMASNGGGGGDENKNKNKNDTTNMVGFGEHTDPQIISLLRSNNTSGLQIYVGDGNWIPVPPDHSSFFVNVGDSLQVMTNGRFKSVRHRVIVDNGCKSRLSMIYFVGPPLSEKIAPLPSLMLGKESLYKEFTWFEYKNAAYATRLATNRLIPYEKIAAS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01845 345 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 341 - -
Aip08g01845 345 PRINTS Isopenicillin N synthase signature 38 55 - -
Aip08g01845 345 PRINTS Isopenicillin N synthase signature 217 238 - -
Aip08g01845 345 PRINTS Isopenicillin N synthase signature 253 279 - -
Aip08g01845 345 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 1 10 341 - -
Aip08g01845 345 Pfam non-haem dioxygenase in morphine synthesis N-terminal 24 94 IPR026992 -
Aip08g01845 345 Gene3D - 2 332 IPR027443 -
Aip08g01845 345 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 171 294 IPR005123 -
Aip08g01845 345 Pfam 2OG-Fe(II) oxygenase superfamily 173 294 IPR044861 -
Aip08g01845 345 SUPERFAMILY Clavaminate synthase-like 15 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01845 Aip-Chr8 43417666 43420102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01845 20 298 Glycosyltransferase AT5G59530 26.644 3.39e-21 91.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01845 08 43417666 43420102 Aip08g01845 08 43417666 43420102 ECH