Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00983 ATGGGAATGAAGAGCACTGGGGGAGAGATTGTTCAAGTCCAAGGTGGTCACATTGTTCGATCCACCGGCCGGAAAGATCGACACAGCAAGGTTTACACGGCGAAAGGGCCGCGTGACCGTCGAGTTAGGCTCTCGGCACACACTGCAATCCAATTCTATGATGTCCAAGACAGGCTTGGTTATGACAGGCCAAGCAAGGCAGTGGACTGGCTTATCAAGAAGGCCAAAGCAGCCATCGACAAACTCGCCGAGCTCCCTCCTTGGGAGCCTACACCTCCTCCTCCCACTACCAATGAGGTGGAGGAGGATCAGAATGGAGGATCAACTGACATGGCAATTGCAGAACAATCAGAGTCTTCTGGTTACAATTTTCAGCTTCAAAGGCAACTTGGTGAAGACCCTGAAAACCAACACCACCACTCAGCATTCATTCCTTCACCTATTGACACTGATGGTGGCATAGCATTTTTCCCAACAACGTCTGCTGCTTCCTCCATCAATTTCCAGAGCTACCCTCCTGAGATAATCTCAAGGACCAACAACTCCTCAGAGGATCTTGGACTTTCCCTTCATTCTTTCCAAGATTCTGGCCTAATTCATCATCATGGACAGTCACAACAAGGAGGTGGTGCAGATCATCAAAACCCTTCTTCAAATGACCAAACTCTCTTTGCTAACTACCAGAGAATGGTGGCCTGGAACAGTGATGCCGGAGGCACGCAAGCCGACATGAACCGTTCCGGTTTCATGGTGAATTCACCTGGTTTTTCTTCTGCTTTTTCTCATCATCAACAAAGGGGTACCCTTCAGTCCAGTTTCTCACCATCACTTCGCCCTTGGAGTGAGATTCCTCAAATGGCTTCTTCTAACGAGCATCACAGCCATGGTGTTGGCTCTGACAGGCCTTCATCTTCTGCTTCTCCTAATTCACATCACTGA 939 0.4899 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDKLAELPPWEPTPPPPTTNEVEEDQNGGSTDMAIAEQSESSGYNFQLQRQLGEDPENQHHHSAFIPSPIDTDGGIAFFPTTSAASSINFQSYPPEIISRTNNSSEDLGLSLHSFQDSGLIHHHGQSQQGGGADHQNPSSNDQTLFANYQRMVAWNSDAGGTQADMNRSGFMVNSPGFSSAFSHHQQRGTLQSSFSPSLRPWSEIPQMASSNEHHSHGVGSDRPSSSASPNSHH 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00983 312 MobiDBLite consensus disorder prediction 199 220 - -
Aip08g00983 312 MobiDBLite consensus disorder prediction 1 30 - -
Aip08g00983 312 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 294 IPR005333 GO:0003700
Aip08g00983 312 PANTHER TRANSCRIPTION FACTOR TCP4 2 294 - -
Aip08g00983 312 MobiDBLite consensus disorder prediction 260 312 - -
Aip08g00983 312 MobiDBLite consensus disorder prediction 85 106 - -
Aip08g00983 312 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Aip08g00983 312 Pfam TCP family transcription factor 23 124 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00983 Aip-Chr8 11513381 11516141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00983 8 280 TCP Transcription Factor Family AT3G15030 44.720 3.29e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip08g00983 TCP 2.6e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00983 08 11513381 11516141 Aip03g02030 03 28992210 28994944 ECH
Aip08g00983 08 11513381 11516141 Aip08g00983 08 11513381 11516141 ECH
Aip03g02030 03 28992210 28994944 Aip08g00983 08 11513381 11516141 PCT