Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00483 ATGGATCCTTCTAGTGGACAACACCATCAGGAAATGTCATCAAACCAGGGACTGGAGAACATGATAGGATGCTCCACAAAGAGTCAGCAACAAGAGAGAAAGCCAAGGCCACAACCAGAACAAGCACTCAAATGTCCAAGATGTGACTCTACCAACACCAAATTCTGCTACTACAACAACTACAGCCTCTCTCAGCCAAGGTACTTCTGCAAATCTTGCAGAAGATACTGGACCAAAGGTGGAACACTCAGGAATGTTCCTGTTGGTGGTGGATGCAGGAAGAACAAGAGATCTTCTAATTCTTCTTCTTCATCAACTACTTCCTCTTCATCTAATTCACCTGCACCCTCTTCAAGGAGGCCTCAAGATCATCATCATGGATTCATCTCACCTAATAATCCTCTCATCACTGCTTTCCCTCATTTGGCTTATGATCATCATCATCCTTCTTCTTCTCCCACCAGTGATCTCACCTTAGCCCTTGCAAGGCTCCAGAAACAATCAATGCCTTTTGATGATCATGATCTCTCAATCTTGGGCAACCCCACAAGCTCCCTTTGTGATATTCTTGGAAATCAAGCCCTTAACACCCACAACACTTCATCAACTGGCTTCTTGGAAGCACTTAGAACCGGATTCCAAGGAAACAATAGTAATAACAATACTCTTCATCATCAGAATCTGTACTATTCATATGGGAATGGGGACATGGGTGAGGTTGTGGACAATGGTGCTGTTAATGGTGGAGACATGTTGCTACCTAATAACTATGATTCAGAGATGAGCAATGCAGCAACTCAAGCAGTGAGTGTCAGCACCATGAAACAAGAACTATGCAGTGAAGCTACTAAGGTTCTTGGTGGTGGCGGTTTTCCATGGCATAATAGTAGTAATGGGGACACAAACATGGGTGAATTTGATTCAGCAAGAGCAACTTGGAATGCTGGTTTCACATCTTCAAATTGGCATGGCCTTCTCCATAGTCCTCTAATGTAA 996 0.4357 MDPSSGQHHQEMSSNQGLENMIGCSTKSQQQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSNSSSSSTTSSSSNSPAPSSRRPQDHHHGFISPNNPLITAFPHLAYDHHHPSSSPTSDLTLALARLQKQSMPFDDHDLSILGNPTSSLCDILGNQALNTHNTSSTGFLEALRTGFQGNNSNNNTLHHQNLYYSYGNGDMGEVVDNGAVNGGDMLLPNNYDSEMSNAATQAVSVSTMKQELCSEATKVLGGGGFPWHNSSNGDTNMGEFDSARATWNAGFTSSNWHGLLHSPLM 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00483 331 ProSitePatterns Zinc finger Dof-type signature. 45 81 IPR003851 GO:0003677|GO:0006355
Aip08g00483 331 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 8 330 IPR045174 GO:0003700|GO:0006355
Aip08g00483 331 Pfam Dof domain, zinc finger 41 97 IPR003851 GO:0003677|GO:0006355
Aip08g00483 331 MobiDBLite consensus disorder prediction 1 32 - -
Aip08g00483 331 ProSiteProfiles Zinc finger Dof-type profile. 43 97 IPR003851 GO:0003677|GO:0006355
Aip08g00483 331 MobiDBLite consensus disorder prediction 1 44 - -
Aip08g00483 331 MobiDBLite consensus disorder prediction 87 131 - -
Aip08g00483 331 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 8 330 - -
Aip08g00483 331 MobiDBLite consensus disorder prediction 94 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00483 Aip-Chr8 3813022 3814436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00483 1 331 C2C2-Dof Transcription Factor Family AT2G28510 36.182 2.11e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aip08g00483 zf-Dof 7.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00483 - - aip:107612899 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00483 08 3813022 3814436 Aip08g00483 08 3813022 3814436 ECH
Aip08g00483 08 3813022 3814436 Aip03g00396 03 3798987 3800464 PCT