Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00425 ATGGTTTTCCCTTCAATCCCAGTGTATTTAGATCCTCCCAATTGGATTCACCAGCAGCAGCAGCAGGTAAATGGCAATGGCAATGAGAGTTCAACTCAGGTGGTTCCGAGATCGGGATCAGAGGGAGGACTCAAGTGTCCTCGGTGTGAATCCAGCAACACAAAGTTCTGCTACTTCAACAACTACAGCCTGTCTCAGCCGCGACACTTCTGCAAGACGTGTAGGCGTTACTGGACAAGAGGCGGTGCTCTTAGGAACGTTCCGGTTGGTGGTGGTTTCCGGAGAAACAAGAAGACCAAGAGGAGTACTAGTAGCAGTAGCCGCCCAGGAGGAAACACTGAAAAGCAGTTAACATCAACATCATCACTTCCGTCAGGTTTTAACCCAGGTTTCATGGCTTCTCTTGAGAACATGACCCTCTATGGAGGAGGATTGCATCAGCATCAGCAGCAGTTTCCTAATTTCTTGAGTGGTTTTGATCCAACTACCACTTCTTCTTCGTTCCCTTTCCTGTTTGGAGAATCTAGGGTTAAATTGGAATCTGGAAACGGAGGGCTATTAAGTACTAGTTTGCCAGAGAACTATTCATGGACTGATCTTGCAGCTGCATCTTCTTCCGCTGCTCATCATCTCTTGTGA 639 0.4742 MVFPSIPVYLDPPNWIHQQQQQVNGNGNESSTQVVPRSGSEGGLKCPRCESSNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKKTKRSTSSSSRPGGNTEKQLTSTSSLPSGFNPGFMASLENMTLYGGGLHQHQQQFPNFLSGFDPTTTSSSFPFLFGESRVKLESGNGGLLSTSLPENYSWTDLAAASSSAAHHLL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00425 212 MobiDBLite consensus disorder prediction 88 125 - -
Aip08g00425 212 MobiDBLite consensus disorder prediction 22 38 - -
Aip08g00425 212 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 34 157 IPR045174 GO:0003700|GO:0006355
Aip08g00425 212 MobiDBLite consensus disorder prediction 22 44 - -
Aip08g00425 212 ProSiteProfiles Zinc finger Dof-type profile. 44 98 IPR003851 GO:0003677|GO:0006355
Aip08g00425 212 MobiDBLite consensus disorder prediction 103 125 - -
Aip08g00425 212 ProSitePatterns Zinc finger Dof-type signature. 46 82 IPR003851 GO:0003677|GO:0006355
Aip08g00425 212 PANTHER DOF ZINC FINGER PROTEIN DOF2.4-LIKE 34 157 - -
Aip08g00425 212 Pfam Dof domain, zinc finger 44 98 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00425 Aip-Chr8 3251772 3252961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00425 1 100 C2C2-Dof Transcription Factor Family AT2G37590 47.586 5.28e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aip08g00425 zf-Dof 3.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00425 - - adu:107461669 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00425 08 3251772 3252961 Aip08g00425 08 3251772 3252961 ECH
Aip08g00425 08 3251772 3252961 Aip03g00468 03 4562968 4564662 PCT