Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00339 ATGGGAGAAATCGAAGAAATTGCAATTGATGTTTGCTCAGATATAGATGTTGATGATATTAGATGCCATAATATAGCGGAGAAAGATGTCAGTGATGAAGAGATTGAAGCAGAAGAATTGGAGAGGAGGATGTGGAAGGATCGAATTAAACTCAAAAGACTCAAGGAAAAACAAAAGATTGCAGCACAGCAAGCTGCAGAGAAGCAAAAGCCGAGGCATACCACTGATCAAGCTCGGAGGAAGAAGATGTCCAGAGCACAAGATGGTATTCTTAAGTATATGCTGAAGCTTATGGAAGTCTGTAAAGCTCGTGGATTTGTGTATGGAATCATTCCTGAAAAGGGAAAACCGGTGAGTGGTTCCTCCGATAACATTAGAGCTTGGTGGAAAGAGAAGGTAAAGTTCGATAAGAATGGCCCTGCTGCCATAACAAAGTATGAAGCAGAGTGTCTTGCTATGAGTGAGGCTGATAACAATCGAAATGGGAACTCTCAGAGCACTCTCCAAGACCTGCAAGATGCAACACTTGGGTCACTCTTATCTTCTTTGATGCAACATTGTGATCCTCCTCAGAGGAAGTATCCATTGGAAAAGGGTATTCCCCCACCTTGGTGGCCAACCGGGAATGAAGATTGGTGGATCCAATCAAATTTACCCCATAATCAGAGTCCTCCTTATAAGAAGCCGCATGATTTGAAAAAGATGTGGAAAGTGGGAGTGCTAACTTCCGTTATAAAGCACATGTCACCTGATATTGCAAAAATAAGGAGGCATGTTCGCCAGTCAAAATGCTTGCAGGATAAGATGACAGCAAAGGAAAGTGCAATTTGGTTAGGGGTATTAAGTCGAGAAGAAGCTCTTATTAGGCAGTATAGTACTGATAATGGTACCAATTATGATGTTGATGGCGTTGATGATGGTGCTGGTTCTGTTTCTTCTAAAGAAGATAGGAGAAATCAAGTTACAGATGCTGAACCATCAGATAACTCGCGAAGGAATTCTATTCAAGAGAAAGATCAAGCTGAGAAACGACCCAAAAGACCTCGATTGAGGTCAAATACCACTAAAAAATTACCACCACAACCTAACAATGAAACTTTACAAGTTGAGCCAGTAAGCACTTTGCCCAGTGAGAACCAGACAGAAGCTCAGGTGGTTGGGCAGATTCATGGAAATGAACGGGGTAATGATACAGATACTTCTATGAGACTAGTGGATAAAGGACCTGAGGTGCCAGCTCAACTACCGGCAACTGGATTTGATCATTTCTCTTATCTTCATCTGAACAACTTAGTTCCCTCGGAAAGCATGTATATGAGCGGTAGGCAATTGCACTATCCTGAGGTGCAAAACCCCGACATGCATCAAGGAACTAGTTACAATATTTATAATCCAGTGGCAGGGTATGACCCTAGTCATGATGGACAGCAGTTGCAGCCCGGCAATGATGAACCAATGCAGCCAGATAATGCAGTCTCTATGCAACCAGAACATAATATGAAAGGAGATGAAATTACTGGAGATTTGCAATATTTTGGTAAAGATCCATTCCAAAGTGAGCTTGACAGACCTATAGATCATTCTTTCTTTGGATCGCCAATCAGTAGCATGTCGTTAGATTTTGGAGGATTCAACAGTCCACCATTCCATTTGGATGATTTCTTGGGTGATGATGAAATGATCCAGTACTTTGGAGCATAG 1701 0.4192 MGEIEEIAIDVCSDIDVDDIRCHNIAEKDVSDEEIEAEELERRMWKDRIKLKRLKEKQKIAAQQAAEKQKPRHTTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAITKYEAECLAMSEADNNRNGNSQSTLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGIPPPWWPTGNEDWWIQSNLPHNQSPPYKKPHDLKKMWKVGVLTSVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQYSTDNGTNYDVDGVDDGAGSVSSKEDRRNQVTDAEPSDNSRRNSIQEKDQAEKRPKRPRLRSNTTKKLPPQPNNETLQVEPVSTLPSENQTEAQVVGQIHGNERGNDTDTSMRLVDKGPEVPAQLPATGFDHFSYLHLNNLVPSESMYMSGRQLHYPEVQNPDMHQGTSYNIYNPVAGYDPSHDGQQLQPGNDEPMQPDNAVSMQPEHNMKGDEITGDLQYFGKDPFQSELDRPIDHSFFGSPISSMSLDFGGFNSPPFHLDDFLGDDEMIQYFGA 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00339 566 MobiDBLite consensus disorder prediction 354 395 - -
Aip08g00339 566 Coils Coil 23 57 - -
Aip08g00339 566 MobiDBLite consensus disorder prediction 69 83 - -
Aip08g00339 566 Gene3D - 157 296 IPR023278 GO:0003700|GO:0005634
Aip08g00339 566 Gene3D - 73 148 IPR023278 GO:0003700|GO:0005634
Aip08g00339 566 PANTHER ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN 8 564 - -
Aip08g00339 566 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 8 564 IPR006957 GO:0005634
Aip08g00339 566 MobiDBLite consensus disorder prediction 60 83 - -
Aip08g00339 566 MobiDBLite consensus disorder prediction 294 400 - -
Aip08g00339 566 Pfam Ethylene insensitive 3 38 285 IPR006957 GO:0005634
Aip08g00339 566 MobiDBLite consensus disorder prediction 309 348 - -
Aip08g00339 566 SUPERFAMILY DNA-binding domain of EIN3-like 166 289 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00339 Aip-Chr8 2561987 2564359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00339 18 566 EIL Transcription Factor Family AT1G73730 51.712 1.30e-179 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Aip08g00339 EIN3 2.1e-126 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00339 08 2561987 2564359 Aip08g00339 08 2561987 2564359 ECH