Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03541 ATGGGAGGTTGGGCAATAGCTGTGCATGGTGGCGCTGGCGTGGACCCAAATCTCCCACCTCAACGCCAGGAAGAGGCCAAGCAACTCCTTGCTCGTTGCCTCAACCTTGGCATCTCTTCTCTTCATTCCAATGCTTCCGCCATCGACGTCGTTGAACTTGTCGTGAGGGAGCTGGAAACGGATCCACTGTTCAACTCTGGGCGCGGATCTGCGCTGACAGAAAACGGTACAGTGGAAATGGAGGCAAGCATCATGGACGGTCCCAAGAGACGTTGCGGCGCCGTTTCTGGCCTCACAACCGTCAAGAACCCTATCTCTCTTGCTCGCCTTGTCATGGATAAGTCCCCCCATTCCTACCTTGCCTTCTCCGGCGCTGAAGATTTCGCCAGGCTCCAGGGTGTGGAGGTTGTGGAGAACGAATACTTCATTACCCCTGAGAATGTTGGGATGCTGAAGCTCGCAAAGGAAGCCAATACAATCCTGTTCGACTACAGGATTCCAACGAACGGTTACGACACGTGCGGCGCGGGAGTGGAGAGCCCAGTGAAGATGAACGGGCTTCCGATAAGCGTGTACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACAAGGAAGGTAGATGTGCGGCTGCCACGTCGACAGGGGGGCTCATGAACAAGATGACAGGTAGGATCGGTGACTCACCGCTCATAGGAGCTGGAACTTACGCGTGTGAGTTGTGCGGTGTGTCGTGCACGGGTGAAGGGGAGGCTATCATACGCGGGACTCTGGCGCGTGAGGTTGCGGCCGTTATGGAATACAAGGGCCTGGGCCTTCAGGAAGCGGTGGACTTTGTGATCAAGAATAGGCTCGACGAAGGGTTCGCTGGGCTCATAGCGGTGTCTAATAAGGGTGAGGTGGCTTATGGGTTCAACTGCAATGGCATGTTTAGGGGCTGCGCCACTGAGGATGGCTTCATGGAAGTGGGAATCTGGGAATAG 981 0.5627 MGGWAIAVHGGAGVDPNLPPQRQEEAKQLLARCLNLGISSLHSNASAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAEDFARLQGVEVVENEYFITPENVGMLKLAKEANTILFDYRIPTNGYDTCGAGVESPVKMNGLPISVYAPETVGCVVVDKEGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACELCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLQEAVDFVIKNRLDEGFAGLIAVSNKGEVAYGFNCNGMFRGCATEDGFMEVGIWE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03541 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Aip07g03541 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Aip07g03541 326 PANTHER L-ASPARAGINASE 1 326 IPR000246 GO:0016787
Aip07g03541 326 CDD Asparaginase_2 5 318 - -
Aip07g03541 326 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 326 - -
Aip07g03541 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03541 Aip-Chr7 125427608 125429336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03541 6 286 Miscellaneous Gene Families AT4G00590 27.723 4.64e-19 85.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03541 07 125427608 125429336 Aip07g03541 07 125427608 125429336 ECH
Aip06g03744 06 135066279 135068606 Aip07g03541 07 125427608 125429336 PCT