Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03531 ATGGAGACACGCGCCGCCACAAAGAGAAGAGCCACCGCCCCCACCCAACTCGAGATTCAGCACCTCAAGAAGCAGCGTGTTGTCTTGGCCGAACTCCCCAATTTACCCAACCTCATTCAATCCCCCATTAACAACAGGAAACCCCATTCCACCATTGAAGCAAAATCACTCAAGTTCCACGATCCCAGTCTTATTGACGCGCCTTATGTTGCCGACATACATAGCTATCTTCATTCAATGGAGATGGAGAAGAAGAGAAGGCCAATGGTTGATTACATTCAAAAAGTTCAGAAAGAAGTTACCGCTAACATGAGAGGTGTATTGGTGGATTGGTTGGTAGAGGTTGCAGACGAGTACAAGCTTCTCTCAGAGACTCTTTTTCTCTCTGTTTCTTACATTGATAGATTTCTATCTATAAACCCTGTTTTTCGATCCAAGTTTCAGTTACTCGGTGTTTCCTCCATGCTCATTGCATCGAAGTATGAAGAAATCAACCCTCCGAATGTAGAGGAATTCTGCTACATCACTGAAGATACATACACGAAATCACAGGTTGTACGGATGGAAGCTGAGATACTCAAATCCCTAAAATTTGAAATGGGGAACCCTACTGTTAAGACCTTCCTATCTATGTATTCAGGAATTGCTTCTGTAGATAAAAAAATTAAGCATTCTCAGGTTGAATTTTTGAGCTGCTATCTTGCTGAGCTAAGTCTTTTGGACTATGATTGTGTGAAATTCTTGCCTTCTATGGTAGCTGCTTCGGTTATATTTCTTGCCAGATTTATTATCTGGCCTGTGGTGCATCCTTGGACTTCATCCTTGCGCGAATGCTCCGGTTATACATCGCTTGAACTTAAAGAATGTGTTCTGATCTTACATGACTTGTATTTGTCGAGAAGGGCAGCATCTTTATCAGCTGTTCGGGAGAAATACAAGCAGCACAAGTTCAAATGGGTTGCAAATCTGTCTTCCCCACCAAGTATACCAACTTCTTACTTTAGAGAAGAGTGA 1014 0.4241 METRAATKRRATAPTQLEIQHLKKQRVVLAELPNLPNLIQSPINNRKPHSTIEAKSLKFHDPSLIDAPYVADIHSYLHSMEMEKKRRPMVDYIQKVQKEVTANMRGVLVDWLVEVADEYKLLSETLFLSVSYIDRFLSINPVFRSKFQLLGVSSMLIASKYEEINPPNVEEFCYITEDTYTKSQVVRMEAEILKSLKFEMGNPTVKTFLSMYSGIASVDKKIKHSQVEFLSCYLAELSLLDYDCVKFLPSMVAASVIFLARFIIWPVVHPWTSSLRECSGYTSLELKECVLILHDLYLSRRAASLSAVREKYKQHKFKWVANLSSPPSIPTSYFREE 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03531 337 SMART cyclin_7 207 295 IPR013763 -
Aip07g03531 337 SMART cyclin_7 110 194 IPR013763 -
Aip07g03531 337 Gene3D - 72 322 - -
Aip07g03531 337 SMART Cyclin_C_2 203 326 IPR004367 -
Aip07g03531 337 Pfam Cyclin, N-terminal domain 72 200 IPR006671 -
Aip07g03531 337 CDD CYCLIN 104 193 IPR013763 -
Aip07g03531 337 Gene3D - 86 201 - -
Aip07g03531 337 CDD CYCLIN 203 294 IPR013763 -
Aip07g03531 337 ProSitePatterns Cyclins signature. 105 136 IPR006671 -
Aip07g03531 337 PANTHER CYCLIN-A3-1-RELATED 51 335 - -
Aip07g03531 337 PIRSF Cyclin_A_B_D_E 2 334 IPR039361 -
Aip07g03531 337 SUPERFAMILY Cyclin-like 203 328 IPR036915 -
Aip07g03531 337 SUPERFAMILY Cyclin-like 65 200 IPR036915 -
Aip07g03531 337 Pfam Cyclin, C-terminal domain 203 325 IPR004367 -
Aip07g03531 337 PANTHER CYCLINS 51 335 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03531 Aip-Chr7 125327208 125329085 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03531 3 336 Core Cell Cycle Gene Families AT5G43080 54.310 1.63e-130 375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03737 06 134955211 134958162 Aip07g03531 07 125327208 125329085 PCT