Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03094 ATGCTAAGAATGCCAAAGCAAGACACCATTCTTCACTGCACTTTGTTCTTGCTACTCTTGCAGATTCTCACAGCTCCCAAACCAGCAACATGCAAATCCACCATAGAACCCTGCACCAACAACGACTCATGCAACGCGCTCTTAGGCTACACACTCTACACCGACCTTAAAGTCTCCGAGGTAGCTTCACTCTTTCAAATCGACCCTATTTCTCTCCTCACCGCAAACGCCATCGACATATCTTACCCTGACGTGGAGCACCATATTCTCCCTTCCAAGCTCTTCATCAAGGTTCCAATTTCATGCTCCTGCGTCGACGGGATCCGAAAATCGGTTTCAACGCATTACAGGACTCGCCCTTCGGACACGCTTTCTTCCATTGCAGACTCTGTATATGGAGGTTTGGTATCTGCGGACCAGCTTTCGGAGGCTAACTCCATAAGTGACCCTTCGGTTCTTGATGTGGGTCAGAGCCTTCTGGTGCCTCTTCCTTGTACTTGTTTTAATGGCACTGATAATTCACTTCCAGCGATTTACATGTCCTATGTGGTTCAGCCTGTTGATTCTTTGGCTGCTATTGCGGCCAGGTATTTCACTACTTTAACTGATTTGATGGATGTTAATGCCATGGGAAGTACTGCTATTACTGATGGTGATATTCTTGCCATTCCAATTCCGGCTTGTGCTTCAAATTTCCCAAGATCTTCTTCTGATTTTGGCTTGCTTGTTCCCAATGGAAGTTATGCCATTACAGCAGGGCATTGTGTGCAGTGTAGCTGTGGACCGCGGGATCTTAATTTGTATTGTATGCCGGCTTCGCTGGCTGTTTCTTGCTCCAGCATGCAATGTAAAAACAGCAATCTTATGCTTGGGAATGTTACGATCCAACAAGGTAGTGGCGGCTGCAATGTTACTTCTTGTAACTATGATGGCATTGTTAATGGAACCATAATGACAATGTTGACACCATCCCTTCAACCTCGATGTCCAGGGTCTAGGGAATTCCCCCCTCTCATTGCCCCACCTACATCTATAAGGAGAGATTCAGAACTAGCACCAGCACCAGCACCTCAATCAGATGGAATCGGTCTAGGAACGCCCAAATCCTCAGTGGTTCCTTCAACAACAGGTCTTCCAGGATTCCCGCCGGCAAATGGTCCTATTAGCGCGCTTTCTTCTGGTGCTTCTGCCGCTTGCTCCTTGGTTATTCCATCATCCGCCATGACATCTGCACTTGTGTTATTACTTGTCAAGTTGATGATCCCTGTGGCATTGTAA 1278 0.4695 MLRMPKQDTILHCTLFLLLLQILTAPKPATCKSTIEPCTNNDSCNALLGYTLYTDLKVSEVASLFQIDPISLLTANAIDISYPDVEHHILPSKLFIKVPISCSCVDGIRKSVSTHYRTRPSDTLSSIADSVYGGLVSADQLSEANSISDPSVLDVGQSLLVPLPCTCFNGTDNSLPAIYMSYVVQPVDSLAAIAARYFTTLTDLMDVNAMGSTAITDGDILAIPIPACASNFPRSSSDFGLLVPNGSYAITAGHCVQCSCGPRDLNLYCMPASLAVSCSSMQCKNSNLMLGNVTIQQGSGGCNVTSCNYDGIVNGTIMTMLTPSLQPRCPGSREFPPLIAPPTSIRRDSELAPAPAPQSDGIGLGTPKSSVVPSTTGLPGFPPANGPISALSSGASAACSLVIPSSAMTSALVLLLVKLMIPVAL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03094 425 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 3 23 415 - -
Aip07g03094 425 ProSiteProfiles LysM domain profile. 114 161 IPR018392 -
Aip07g03094 425 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 23 415 - -
Aip07g03094 425 SUPERFAMILY LysM domain 180 225 IPR036779 -
Aip07g03094 425 Gene3D LysM domain 110 170 IPR036779 -
Aip07g03094 425 MobiDBLite consensus disorder prediction 343 369 - -
Aip07g03094 425 CDD LysM 114 161 IPR018392 -
Aip07g03094 425 CDD LysM 181 223 IPR018392 -
Aip07g03094 425 SMART LysM_2 181 224 IPR018392 -
Aip07g03094 425 SMART LysM_2 115 162 IPR018392 -
Aip07g03094 425 Pfam LysM domain 116 162 IPR018392 -
Aip07g03094 425 Pfam LysM domain 182 224 IPR018392 -
Aip07g03094 425 ProSiteProfiles LysM domain profile. 180 223 IPR018392 -
Aip07g03094 425 Gene3D LysM domain 171 235 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03094 Aip-Chr7 118361680 118365137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03094 15 400 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 68.542 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03094 - - gmx:100808966 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03094 07 118361680 118365137 Aip07g03094 07 118361680 118365137 ECH