Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02889 ATGTTGCCATCAAGTGTAGATCACCATATCATGCTGCATAACCATATTCCTATGCCTATGCCACCAAGGTGGAAACCTACCATAGAGGTAGCCCCTAACTGCCCCCGCTGCGCTTCAACCAACACCAAATTCTGTTACTACAACAACTACAGCCTCTCTCAGCCTCGCTACTTCTGTAAGGCCTGCCGCCGATACTGGACTAAAGGCGGCTCCCTCCGCAACGTCCCCGTCGGCGGTGGATGCCGCAAGAACCGCCGTTCCAAGTCCGCCAGAAACCAAACGCAACACCGCCTTCAGGGAGACTACTCATCGTCATCTGCTGATGCTCATCAACCATCATCATCACGTGACATAGACATGGCGGTTGTGTTTGCCAACTTCTTGAACCAAGCTCCAATAAGTGAGGATCATGGCGGTTCGTCTTCCTCCAATAATTCTTTAAGCGGTGAGACCGAGAACGATGCAGTAGTTGTGCAGCCGAAGAAGAATGATGATTTCGGAGTTCTATGTGCTGACGTGGAACCTTCTTCGTTTGAACAAGAACTGAGTCTGATGAGTGGGATCGAGTTGGATGGGTTTGATGATGTGGTCCAACATGATGATGGTGTTGCTACATGGCAACCACCACTACCACCGCCATCAATGATGCAGATGCAGGAGATGGAATTCTCCATGGTGCCATTGATGAATGAGCATCATGATGATGATGATGAGTTATTGATGATGCCATCTTCTATGAATTTAGTAAGTGATGACGCTTCTTGGAACACTAATAATTGGAGTTCCTTTGATCTTTCCACCATGGAAGTCTTCTCCTCCTCGTCATCAATTAATTAA 837 0.4779 MLPSSVDHHIMLHNHIPMPMPPRWKPTIEVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKNRRSKSARNQTQHRLQGDYSSSSADAHQPSSSRDIDMAVVFANFLNQAPISEDHGGSSSSNNSLSGETENDAVVVQPKKNDDFGVLCADVEPSSFEQELSLMSGIELDGFDDVVQHDDGVATWQPPLPPPSMMQMQEMEFSMVPLMNEHHDDDDELLMMPSSMNLVSDDASWNTNNWSSFDLSTMEVFSSSSSIN 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02889 278 PANTHER DOF ZINC FINGER PROTEIN DOF1.2 18 140 - -
Aip07g02889 278 Pfam Dof domain, zinc finger 32 86 IPR003851 GO:0003677|GO:0006355
Aip07g02889 278 MobiDBLite consensus disorder prediction 133 153 - -
Aip07g02889 278 MobiDBLite consensus disorder prediction 93 113 - -
Aip07g02889 278 MobiDBLite consensus disorder prediction 76 114 - -
Aip07g02889 278 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 18 140 IPR045174 GO:0003700|GO:0006355
Aip07g02889 278 ProSiteProfiles Zinc finger Dof-type profile. 32 86 IPR003851 GO:0003677|GO:0006355
Aip07g02889 278 ProSitePatterns Zinc finger Dof-type signature. 34 70 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02889 Aip-Chr7 114952899 114954040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g02889 1 270 C2C2-Dof Transcription Factor Family AT1G21340 36.332 8.13e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aip07g02889 zf-Dof 3.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02889 - - adu:107460580 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02889 07 114952899 114954040 Aip07g02889 07 114952899 114954040 ECH