Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02552 ATGAAGCAGTGGTTCTTTGGAGCTGGTTTGTTGGTTCTGTTAGTGGCAGTTGAAGTAGAAGCAGATGGTTTTGTGAAGACAAGAGGGGTGCAGCTTGTGCTGAATGGTAGCCCCTACTATGCCCATGGTTTCAATGCTTACTGGCTCATGTACATGGCCTCTGATCCATCTCAGAGGACCAAGGTCTCCTCTACATTTCAAGAGGCTTCAAATAATGGCCTTAACATTGCAAGAACTTGGGCTTTCAGTGATGGTGGATATAAACCTCTTCAATACTCTCCTGGTTCTTATAATGAGCAAATGTTCCAGGGGTTGGACTTTGTAATAGCGGAAGCCGGAAAATATGGGATAAAGCTTGTGTTGAGTTTGGTGGATAACTATGAGAATTTTGGAGGGAAGAAGCAATATGTGGAGTGGGCAAGGAATGAGGGTGGACAGTCCATTTATTCTGAGGACGATTTCTTCACAAATTCAGTTGTTAAGGGATACTACAAAAATCATATCAAGACTGTACTTACAAGACGTAACAGCATCACTGGTGTTGCTTACAAAGATGACCCAACCATAATGGCTTGGGAGCTTATGAACGAGATTAGGTGCAAATCAGATCAATCAGGAAATACAGTTCAGGGTTGGATTAGTGAGATGGCATCTTACTTGAAATCCATAGATGGAAACCACTTGCTAGAAGCTGGTCTTGAGGGTTTCTATGGTCAATCAAAGAGTGACTCTAATCCCAACTTCCAAGTTGGAACAGATTTTATTGCTAATAACCAAATCCCCGCCATTGATTTTGCAACAGTCCACGCCTACCCTGATCAATGGTTATCAAGCTCAAGCTATGAAGATCAAATATCTTTCTTGGGAAAGTGGCTAAATGAGCACATCCAAGATGCACAAAACACCCTTCACAAGCCAATACTAGTTGGGGAGTTTGGTGTTTCAACAAAGAGTTTTGGTTCTAACTTAGAACCAAGGGAAAGGTTTTACAACACCGTGTATTCTGCCATATACTCATCGGCAAGTGGTGGTGGTGCCGCTGTTGGCGGCTTGTTCTGGCAACTTCTGGCTCAAGGACTGGATTCGTTCCGAGACGGTTATGAGGTTGTGTTAGATGAGAACCCCTCCATGGCTGCTTTGATCTCTCAAGAGTCTCAGAAGCTGAACCGAATTCGCAAGATGTATGCCAGACTTAGAAACATTGAGAAATGGAACAAAGCAAGGGAAATCAGAAGCTCACAATGGCATGGTGGCTCTGATGCCAGAAACTGA 1272 0.4347 MKQWFFGAGLLVLLVAVEVEADGFVKTRGVQLVLNGSPYYAHGFNAYWLMYMASDPSQRTKVSSTFQEASNNGLNIARTWAFSDGGYKPLQYSPGSYNEQMFQGLDFVIAEAGKYGIKLVLSLVDNYENFGGKKQYVEWARNEGGQSIYSEDDFFTNSVVKGYYKNHIKTVLTRRNSITGVAYKDDPTIMAWELMNEIRCKSDQSGNTVQGWISEMASYLKSIDGNHLLEAGLEGFYGQSKSDSNPNFQVGTDFIANNQIPAIDFATVHAYPDQWLSSSSYEDQISFLGKWLNEHIQDAQNTLHKPILVGEFGVSTKSFGSNLEPRERFYNTVYSAIYSSASGGGAAVGGLFWQLLAQGLDSFRDGYEVVLDENPSMAALISQESQKLNRIRKMYARLRNIEKWNKAREIRSSQWHGGSDARN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02552 423 Gene3D Glycosidases 20 392 - -
Aip07g02552 423 PANTHER - 16 412 IPR045053 GO:0004553
Aip07g02552 423 Pfam Cellulase (glycosyl hydrolase family 5) 54 328 IPR001547 GO:0004553|GO:0071704
Aip07g02552 423 SUPERFAMILY (Trans)glycosidases 24 376 IPR017853 -
Aip07g02552 423 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 16 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02552 Aip-Chr7 106136667 106138604 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02552 07 106136667 106138604 Aip07g02552 07 106136667 106138604 ECH
Aip05g00842 05 11299638 11301754 Aip07g02552 07 106136667 106138604 ECH
Aip06g03929 06 136945683 136948828 Aip07g02552 07 106136667 106138604 PCT