Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02551 ATGGATTCAACTTGTGCAGCACTGAGTGCCACCAATCTAGTTCAACTTAGTAACAAATTTGGAAGAAACAGAGCAACTCTGTTCTGGGGTGAATCTAAAATAGCCCCTCAAATAAGAACAACAACAACGTTCTTGAGTGTTCAATCAACCAAGCCTGCAACTGCACACGCTGTTCTCACATCAGATGTGAATCAAGAGTCCACGGCATTCCAGGAGGAACATAATTTTGAAACCCCTGAAGCAGACCCAAAAGGTGTAGCTTCTATCATTTTGGGTGGAGGTGCTGGAACTCGCCTCTTTCCTCTTACTGGCAGAAGAGCCAAACCTGCGGTACAAATTTCTGAGAGTGGTTTTTGTTTTAATTGTTTCATGCAAGCTTTCTGGAAATTTGAATGGACTTTGCAGGTTCCAATAGGAGGGTGTTATAGACTCATTGATATCCCTATGAGCAATTGCATCAATAGTGGCATCAAGAAAATATTCATTTTAACTCAGTTCAACTCTTTCTCCCTCAATCGTCACTTGTCTCGCTTATACAGCTTTGGAAATGGCCTTAGTTTTGGGGATGGTTTTGTGGAGGTCTTGGCTGCAACTCAAACACCTGGAGAAACAGGGAAGAAATGGTTCCAAGGGACAGCTGATGCTGTGAGGCAATTTATATGGGTCTTTGAGGATGCCAAGAACAAGAATATTGAGAATATATTGATACTTTCTGGTGATCATCTTTACCGAATGGACTATATGAACTTTGTACAGAAACATATCGACACAAATGCTGATATCACAGTTTCGTGTGTGCCCATGGATGATAGCCGCGCATCAGATTATGGGCTGATGAAAATTGATAAAACAGGACGGATTGTACAGTTTGCAGAAAAGCCAAAGGGATCTGATCTGAAGGAAATGAAAGTTGACACCACTGTCCTCGGGTTATCTGCAGAAGAAGCAAAGAAACATCCTTACATTGCATCAATGGGTGTCTATGTCTTTAGAACTGAAACCCTGCTGAAACTACTAAGATGGAGCTGTTCTTCGTGCAATGACTTTGGATCTGAAATAATCCCATCTGCTGTGAAAGATCACAATGTCCAGGCATATTTGTTTAATGATTACTGGGAAGATATTGGAACTATAAAGTCTTTCTTTGACGCAAATTTGGCCCTTACAGAGCAGCCTCCAAAATTTGAATTCTATGATCCAAAGACTCCTTTCTTCACTTCCCCAAGGTTCCTACCACCCACTAAAGTAGAAAAATGCAAGATCGTGGATGCAATTATTTCTCATGGGTGCTTCTTGAGGGAGTGCAGCGTTCAACATTCTATTGTTGGGGTGCGCTCACGTCTAGAGTCCGGTGTGGAGCTTAAGGATACCATGATGATGGGTGCTGATTATTATCAAACTGAGTCTGAAATTGCATCCTTTCTAGCAGAAGGAAAGGTTCCAATTGGTGTGGGAGAGAATACCAAAATCAGGAATTGTATCATTGACAAGAATGCCAAGATAGGAAGAAATGTGATTATTGCAAATGGTGATGGTGTGGAAGAAGCAGACAGGCCTAATGAAGGATTCTACATTAGGTCTGGCATCACAGTTGTTCTAAAAAATGCAACAATCAAAGATGGAACAGTAATATGA 1635 0.4128 MDSTCAALSATNLVQLSNKFGRNRATLFWGESKIAPQIRTTTTFLSVQSTKPATAHAVLTSDVNQESTAFQEEHNFETPEADPKGVASIILGGGAGTRLFPLTGRRAKPAVQISESGFCFNCFMQAFWKFEWTLQVPIGGCYRLIDIPMSNCINSGIKKIFILTQFNSFSLNRHLSRLYSFGNGLSFGDGFVEVLAATQTPGETGKKWFQGTADAVRQFIWVFEDAKNKNIENILILSGDHLYRMDYMNFVQKHIDTNADITVSCVPMDDSRASDYGLMKIDKTGRIVQFAEKPKGSDLKEMKVDTTVLGLSAEEAKKHPYIASMGVYVFRTETLLKLLRWSCSSCNDFGSEIIPSAVKDHNVQAYLFNDYWEDIGTIKSFFDANLALTEQPPKFEFYDPKTPFFTSPRFLPPTKVEKCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVELKDTMMMGADYYQTESEIASFLAEGKVPIGVGENTKIRNCIIDKNAKIGRNVIIANGDGVEEADRPNEGFYIRSGITVVLKNATIKDGTVI 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02551 544 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 92 111 IPR005836 GO:0005978|GO:0008878
Aip07g02551 544 SUPERFAMILY Trimeric LpxA-like enzymes 406 544 IPR011004 -
Aip07g02551 544 CDD ADP_Glucose_PP 89 375 - -
Aip07g02551 544 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 69 409 IPR029044 -
Aip07g02551 544 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 133 544 - -
Aip07g02551 544 SUPERFAMILY Nucleotide-diphospho-sugar transferases 88 113 IPR029044 -
Aip07g02551 544 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 2 114 IPR011831 GO:0005978|GO:0008878
Aip07g02551 544 CDD LbH_G1P_AT_C 412 538 - -
Aip07g02551 544 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 2 114 - -
Aip07g02551 544 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 133 544 IPR011831 GO:0005978|GO:0008878
Aip07g02551 544 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 323 333 IPR005836 GO:0005978|GO:0008878
Aip07g02551 544 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 208 216 IPR005836 GO:0005978|GO:0008878
Aip07g02551 544 SUPERFAMILY Nucleotide-diphospho-sugar transferases 136 505 IPR029044 -
Aip07g02551 544 Pfam Nucleotidyl transferase 135 390 IPR005835 GO:0009058|GO:0016779
Aip07g02551 544 Pfam Nucleotidyl transferase 88 115 IPR005835 GO:0009058|GO:0016779
Aip07g02551 544 Gene3D Hexapeptide repeat proteins 410 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02551 Aip-Chr7 106131667 106136114 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02551 07 106131667 106136114 Aip07g02551 07 106131667 106136114 ECH
Aip06g03930 06 136949384 136954226 Aip07g02551 07 106131667 106136114 PCT