Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02498 ATGGCGGAGGAAGGAGTAGTGATTGGTTGCCACAGCGTGGATGAGTGGAAGGATCAGCTCAAGAAGGCAGAAGACTCCAACAAACTGGTTGTAGTGGATTTCACAGCTTCTTGGTGTGGGCCGTGCCGCTTCATTGCCCCAATTGTGGCGGAGTTTGCTAAGAAGTTCACAAATGTGGCGTTCCTGAAGGTGGATGTGGATGAATTGAAGACTGTGGCTGAGGAGTGGGGAATTGAGGCGATGCCAACCTTCCTCTTCATCAAACAAGGTAAATTAGTAGACAAGGTCGTTGGTGCTAAGAAGGATGAACTTCAATCCACTATCACCAAGCATGTTGCTGCTGCTGCTTGA 351 0.49 MAEEGVVIGCHSVDEWKDQLKKAEDSNKLVVVDFTASWCGPCRFIAPIVAEFAKKFTNVAFLKVDVDELKTVAEEWGIEAMPTFLFIKQGKLVDKVVGAKKDELQSTITKHVAAAA 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02498 116 PRINTS Thioredoxin family signature 30 38 - -
Aip07g02498 116 PRINTS Thioredoxin family signature 38 47 - -
Aip07g02498 116 PRINTS Thioredoxin family signature 77 88 - -
Aip07g02498 116 CDD TRX_family 18 108 - -
Aip07g02498 116 PANTHER THIOREDOXIN 1 114 - -
Aip07g02498 116 PANTHER THIOREDOXIN 1 114 - -
Aip07g02498 116 TIGRFAM thioredoxin: thioredoxin 22 111 IPR005746 GO:0015035
Aip07g02498 116 Gene3D Glutaredoxin 1 115 - -
Aip07g02498 116 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
Aip07g02498 116 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Aip07g02498 116 SUPERFAMILY Thioredoxin-like 8 113 IPR036249 -
Aip07g02498 116 Pfam Thioredoxin 11 109 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02498 Aip-Chr7 104742209 104743144 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02498 07 104742209 104743144 Aip07g02498 07 104742209 104743144 ECH
Aip06g00095 06 911956 913399 Aip07g02498 07 104742209 104743144 PCT