Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02411 ATGGAGCATAATAAGCTCACATTAATAAATCCAATCTCAGTACTAATAACACTTTGTGTATTAGTATCAGAGGGGAAAGCAACTACCTTCACACTACTCAACAAATGTGACTACACTGTGTGGCCGGGAATTCTCACTAACGCTGGTGTCGACCCTCTTCCGGTCACCGGCTTCGCCCTCCGAACTGGCGAGTCCAAAACCATCACGGCACCAACCACCTGGGGTGGCCGTTTCTGGGGCAGGACACTCTGCGCCCAAGACTCCGCCGGAAAATTCTCATGCGGCACTGGCGATTGCGGCTCCGGCAAACTAGAATGTGCTGGCAGCGGTGCCACGCCGCCGGCAACCCTGGCAGAGTTCACCCTCCATGGCGCCGGAGGACTAGATTTCTTTGACGTCAGCTTGGTCGACGGTTACAACCTCCCGATTACGGTGGTTCCGCAGGGTGGCTCCGGCGAAAACTGCACCGTCACGGGGTGCGTAGGAGACCTCAATGGCGATTGTCCATCGGAGCTGAGGGTTATGAGCGAGGATGGGAAACGTGGCGTGGCGTGTAAGAGCGCGTGCGATGCGTTCCGGTTGCCGCAGTATTGCTGCGACGGCGCGTACCGCTCACCGGACACTTGCAAGCCTTCGTCTTACTCGAAGGTGTTCAAGAGCGTGTGCCCACGCGCGTATAGCTACGCGTATGACGACAAGACGAGCACATTTACGTGCGCATCTGCCGATTACACCATTACGTTTTGTCCTTCCCCCGATACTAACCCCAGTAGTAAGAAATCGTGGGAGGGACAAAACTCGAACTCAGATAGTAACGAATCTTCTTCGTCATCATCTTCATCTTCGTCTTCTACTCCAACATCACCACAGGTGAGCAAGGGAGGAATGGTGTACGTAGGTGCACTAGACCAAAGTGAAATACCATGGTCAGCGTGCACTCGTGCTAGGGAATCCCAATCCATTGCAACCTTCATCGTCATTATGGCAAGTTGGCGCTTGTGGCAACTGCTCTTTTAG 1017 0.5388 MEHNKLTLINPISVLITLCVLVSEGKATTFTLLNKCDYTVWPGILTNAGVDPLPVTGFALRTGESKTITAPTTWGGRFWGRTLCAQDSAGKFSCGTGDCGSGKLECAGSGATPPATLAEFTLHGAGGLDFFDVSLVDGYNLPITVVPQGGSGENCTVTGCVGDLNGDCPSELRVMSEDGKRGVACKSACDAFRLPQYCCDGAYRSPDTCKPSSYSKVFKSVCPRAYSYAYDDKTSTFTCASADYTITFCPSPDTNPSSKKSWEGQNSNSDSNESSSSSSSSSSSTPTSPQVSKGGMVYVGALDQSEIPWSACTRARESQSIATFIVIMASWRLWQLLF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02411 338 ProSitePatterns Thaumatin family signature. 90 106 IPR017949 -
Aip07g02411 338 MobiDBLite consensus disorder prediction 256 292 - -
Aip07g02411 338 Pfam Thaumatin family 34 250 IPR001938 -
Aip07g02411 338 PANTHER OS03G0233200 PROTEIN 11 277 IPR001938 -
Aip07g02411 338 PANTHER BNAA02G17480D PROTEIN 11 277 - -
Aip07g02411 338 CDD TLP-PA 29 249 - -
Aip07g02411 338 SMART tha2 30 250 IPR001938 -
Aip07g02411 338 SUPERFAMILY Osmotin, thaumatin-like protein 28 251 IPR037176 -
Aip07g02411 338 Gene3D Thaumatin 28 250 IPR037176 -
Aip07g02411 338 PRINTS Pathogenesis-related protein signature 29 41 IPR001938 -
Aip07g02411 338 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Aip07g02411 338 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Aip07g02411 338 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Aip07g02411 338 ProSiteProfiles Thaumatin family profile. 27 250 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02411 Aip-Chr7 101584730 101588056 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02411 07 101584730 101588056 Aip05g00399 05 4464212 4465472 ECH
Aip07g02411 07 101584730 101588056 Aip07g02411 07 101584730 101588056 ECH
Aip05g00398 05 4442141 4443550 Aip07g02411 07 101584730 101588056 ECH