Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01996 ATGAGCAACACTATAGTATGCCCTTCTGATCAATCAATCAAACATGGTCCAGAAAGTGAGTATTCTGATGAAGAAAGGAAGAAAAAGCTTGGTTCCGTGAAGAAGTTGGCAATTAGTGCCTCAAAAAACTATAGGAATTCCTTGAAGAAGGGACGGCGACACAGCAGGGTGATGTCGGTCTCTATCGAGGATGAACTTGATGCAGAAGAGATGAAGGCGGTCGACGCCTTTCGCCAAGTACTTGTTTTGGAAGAGCTCTTGCCCTCAATGCATGATGATCATCACACAATGCTAAGATTCTTGAGAGCAAGAAAGTTTGATGTGGAGAAAACAAAACAGATGTGGGCAGATATGCTTAAATGGAGGAAGGAATTTGGAGCAGACACTATCATGGAGAACTTTGAATTCAAAGAAATAGATGATGTTCTGAAATACTACCCACAAGGGCATCATGGAGTTGATAAGGATGGAAGACCTGTTTACATTGAAAGATTGGGTCAAGTTGATTCTACAAAATTGTTGCAAGTAACAACTATCGACCGTTATCTTAAGTACCATGTAAAAGAGTTTGAGAGGACCTTCAGAATTAAAATGCCAGCGTGCTCTATTGCTGCAAAAAAGCACATTGACCAAAGCACAACAATTTTGGATGTGCAAGGAGTGGGACTCAAAAGTCTGAACAAAGCTGCAAGGGATCTCATTCAGCGTCTTCAGAAGATTGATGGTGACAATTATCCTGAGTCCCTGAACCGTATGTTCATCATCAATGCTGGACCAGGATTTAGGCTCCTGTGGAATACCGTTAAGACATTCCTTGACCCCAAGACCACCTCAAAAATCCATGTGCTAGGTAACAAATACCAGAGCAAATTGCTTGAAATCATTGATGCCAGTGAACTTCCAGAGTTCTTGGGTGGCACTTGTACTTGTGCTGATAAAGGTGGTTGCATGCGTTCTGACAAGGGACCATGGAATGATCCAATGATCTTGCAGATGGTACAAAATGGCAAGGGCAGATACAATACAAGAACCTTATCTGGGATCAATGAGAAACCACTTTCAGAAAATGCGGTAACACAAGAGCAGGTACTGAAAATAATTTGTTCTGAAAATTCTATGTATTTATTTCATTTTGTGTATAAGTATGAAGACCTTGATCCATCTTTGAAGAAGTTAGTAGACACTAATAAATATACACTTTCCACAGCTGAGAAAACTAAACTTACTAGTCAGTTAGTTGGTGGATTAATGGCCATTTTCATGAGTTTTATAACAATGGTCCGCTTCACGAGGAACATGCCAAGGAAAATCACAGAAGCAGCCCTATATGGTGGCGCAGTATACTATGATGGTGCTATGATGAGAGCCCCCAAAGTCTCAATTAACGATCACATGACCATGATGAAGCGCATGGCTGAACTAGAAGAAAAAATGAATGCTCTCAGCATAAGGCCAATCATGTCACCTGAAAAGGAGGAACTACTAAACAGTGCTGTAAGCAGAGTTAGTACTTTGGAACAAGATTTAGCTGCAACCAAAAAGGCACTTGATGAAGCCCTTGCTAAACAAATTGAGCTCCAATCCGAAATAGACAAGAAAAGGAAGAAGAAAAATAAGTTGAAGAAGTTGTTTTGCTACCGTGAGTGA 1647 0.4062 MSNTIVCPSDQSIKHGPESEYSDEERKKKLGSVKKLAISASKNYRNSLKKGRRHSRVMSVSIEDELDAEEMKAVDAFRQVLVLEELLPSMHDDHHTMLRFLRARKFDVEKTKQMWADMLKWRKEFGADTIMENFEFKEIDDVLKYYPQGHHGVDKDGRPVYIERLGQVDSTKLLQVTTIDRYLKYHVKEFERTFRIKMPACSIAAKKHIDQSTTILDVQGVGLKSLNKAARDLIQRLQKIDGDNYPESLNRMFIINAGPGFRLLWNTVKTFLDPKTTSKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMRSDKGPWNDPMILQMVQNGKGRYNTRTLSGINEKPLSENAVTQEQVLKIICSENSMYLFHFVYKYEDLDPSLKKLVDTNKYTLSTAEKTKLTSQLVGGLMAIFMSFITMVRFTRNMPRKITEAALYGGAVYYDGAMMRAPKVSINDHMTMMKRMAELEEKMNALSIRPIMSPEKEELLNSAVSRVSTLEQDLAATKKALDEALAKQIELQSEIDKKRKKKNKLKKLFCYRE 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01996 548 Gene3D - 126 337 IPR036865 -
Aip07g01996 548 SUPERFAMILY CRAL/TRIO domain 138 335 IPR036865 -
Aip07g01996 548 Pfam CRAL/TRIO, N-terminal domain 84 117 IPR011074 -
Aip07g01996 548 CDD SEC14 139 307 IPR001251 -
Aip07g01996 548 Coils Coil 502 543 - -
Aip07g01996 548 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 138 312 IPR001251 -
Aip07g01996 548 PRINTS Cellular retinaldehyde-binding protein signature 298 307 - -
Aip07g01996 548 PRINTS Cellular retinaldehyde-binding protein signature 96 118 - -
Aip07g01996 548 PRINTS Cellular retinaldehyde-binding protein signature 265 284 - -
Aip07g01996 548 Coils Coil 223 243 - -
Aip07g01996 548 SMART sec14_4 138 309 IPR001251 -
Aip07g01996 548 SUPERFAMILY CRAL/TRIO N-terminal domain 64 133 IPR036273 -
Aip07g01996 548 Pfam CRAL/TRIO domain 144 306 IPR001251 -
Aip07g01996 548 Gene3D - 25 125 - -
Aip07g01996 548 SMART CRAL_TRIO_N_2 93 118 IPR011074 -
Aip07g01996 548 Coils Coil 464 484 - -
Aip07g01996 548 MobiDBLite consensus disorder prediction 1 27 - -
Aip07g01996 548 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 16 539 - -
Aip07g01996 548 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 16 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01996 Aip-Chr7 59370214 59373637 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01996 07 59370214 59373637 Aip06g00038 06 283931 286452 PCT