Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03929 ATGAAGCATAGGTTGTTCTTTATGCCATTTTCAATTATTGTATGCATCATGATGATACTCATAGTAGAAGCAGATAACAATAATGATGGTTTTGTGAAAGCAAGAGGGATTCAGCTTGTGTTGAATGGAAACCCTTATTATGCAAATGGTTTCAATGCATATTGGCTAATGTTTGAAGCATCTGAACCTTCTCAAAGAAACAAAGTGTCTTCAGCATTTCAAGATGCTTCAAGCCTTGGACTTAACATTGCAAGAACTTGGGCTTTCAGTGATGGTGGCTATAAACCTCTTCAATACTCTCCTGGATCCTACAATGAAGACATGTTCCAAGGGTTGGATTTTGTAATATCAGAAGCGAAAAAATATGGGTTGAAGCTTGTGTTGAGTTTGGTAAATAATTATGAGGACATGGGAGGGAAGAAACAATATGTTGAATGGGGAAGGAGTCAGGGCCAATCCATAAATTCTGAAGATGATTTCTACACAAACCCTGTTGTCAAGGGATACTATAAAAACCACATTAAGAGGGTACTTACTAGACATAATAGCATCACTGGAATTGCTTACAAAGATGATCCAACTATAATGGCTTGGGAGCTCATGAATGAAATTAGATGCAATTCAGATCAATCTGGAAAGACAGTTCAGGGTTGGATTGAAGAGATGGCATCTTATGTGAAATCCATAGATGGAAATCACTTGCTTGAAGCTGGTCTTGAAGGTTTTTATGGGCAATCAAAGCAAGAGACTAACCCAAGCTTCCAAGCAGGAACAGATTTCATAGCAAATAATCAAATCCTTGAAATTGATTTTGCAACGGTTCACTCGTACCCTGACCAATGGCTATCAGGTTCAAGTTATGAAGATCAAATCTCATTCCTAAGTCATTGGCTTAATGAACATATACAAGATGCACAGAACATTCTTCACAAGCCAGTTCTCTTTGCTGAGTTTGGTATTTCAACAAAAACTTTTGGTTCTAACACAAAACCAAGGGACCAATTTTACAACACGGTATACTCCAAGATCTATTCGTCGGCAAGTGGTGGCGGCGCAGCTGTTGGTTGCTTGTTCTGGCAACTCCTTGACCAAGGAATGGATACTTTTCGCGACGGTTATGAGGTAGTTATTAGCGAAAGCCCCTCAACGGCTAGTTTGATTGCCCAAGAATCTCAAAAGATGAACCGGATTCGAAAAAAGTACTAA 1206 0.3897 MKHRLFFMPFSIIVCIMMILIVEADNNNDGFVKARGIQLVLNGNPYYANGFNAYWLMFEASEPSQRNKVSSAFQDASSLGLNIARTWAFSDGGYKPLQYSPGSYNEDMFQGLDFVISEAKKYGLKLVLSLVNNYEDMGGKKQYVEWGRSQGQSINSEDDFYTNPVVKGYYKNHIKRVLTRHNSITGIAYKDDPTIMAWELMNEIRCNSDQSGKTVQGWIEEMASYVKSIDGNHLLEAGLEGFYGQSKQETNPSFQAGTDFIANNQILEIDFATVHSYPDQWLSGSSYEDQISFLSHWLNEHIQDAQNILHKPVLFAEFGISTKTFGSNTKPRDQFYNTVYSKIYSSASGGGAAVGCLFWQLLDQGMDTFRDGYEVVISESPSTASLIAQESQKMNRIRKKY 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03929 401 Pfam Cellulase (glycosyl hydrolase family 5) 49 339 IPR001547 GO:0004553|GO:0071704
Aip06g03929 401 PANTHER - 11 401 IPR045053 GO:0004553
Aip06g03929 401 SUPERFAMILY (Trans)glycosidases 31 384 IPR017853 -
Aip06g03929 401 Gene3D Glycosidases 27 398 - -
Aip06g03929 401 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 11 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03929 Aip-Chr6 136945683 136948828 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03929 06 136945683 136948828 Aip06g03929 06 136945683 136948828 ECH
Aip06g03929 06 136945683 136948828 Aip07g02552 07 106136667 106138604 PCT